RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 MTMR8Q96EF0 704 aa21.17■□□□□ 0.98
GTF3A-204ENST00000438571 CNNM2Q9H8M5 875 aa21.17■□□□□ 0.98
GTF3A-204ENST00000438571 SLC28A3Q9HAS3 691 aa21.17■□□□□ 0.98
GTF3A-204ENST00000438571 SUPT16HQ9Y5B9 1047 aaKnown RBP21.17■□□□□ 0.98
GTF3A-204ENST00000438571 MUC3AQ02505 3323 aa21.17■□□□□ 0.98
GTF3A-204ENST00000438571 KLRF2D3W0D1 207 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 ARHGEF15O94989 841 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 CYP21A2P08686 494 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 ATP2A2P16615 1042 aaKnown RBP21.16■□□□□ 0.98
GTF3A-204ENST00000438571 IGFBP4P22692 258 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
GTF3A-204ENST00000438571 ARHGEF16Q5VV41 709 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 PPP2R2DQ66LE6 453 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 POTEDQ86YR6 584 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 MCF2L2Q86YR7 1114 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 IL31RAQ8NI17 732 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 DHX38Q92620 1227 aaKnown RBP21.16■□□□□ 0.98
GTF3A-204ENST00000438571 ZFP91Q96JP5 570 aaPredicted RBP21.16■□□□□ 0.98
GTF3A-204ENST00000438571 DDX41Q9UJV9 622 aaKnown RBP21.16■□□□□ 0.98
GTF3A-204ENST00000438571 TTC28Q96AY4 2481 aa21.16■□□□□ 0.98
GTF3A-204ENST00000438571 SIP14410 1827 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 SORBS3O60504 671 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 KPNA6O60684 536 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 PFKMP08237 780 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 HSD17B4P51659 736 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 PTPN11Q06124 597 aaPredicted RBP21.15■□□□□ 0.98
GTF3A-204ENST00000438571 STXBP2Q15833 593 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 STOX1Q6ZVD7 989 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 HOMER1Q86YM7 354 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 IWS1Q96ST2 819 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 AMNQ9BXJ7 453 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 PCDHA11Q9Y5I1 949 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 KAT6AQ92794 2004 aa21.15■□□□□ 0.98
GTF3A-204ENST00000438571 PALM3A6NDB9 673 aaPredicted RBP21.14■□□□□ 0.97
GTF3A-204ENST00000438571 RFXAPO00287 272 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 PITPNM1O00562 1244 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 RGS20O76081 388 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 NR3C2P08235 984 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 ZNF286BP0CG31 522 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 HOXA13P31271 388 aaPredicted RBP21.14■□□□□ 0.97
GTF3A-204ENST00000438571 GHRHRQ02643 423 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 GPNMBQ14956 572 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 PTGISQ16647 500 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 NOD1Q9Y239 953 aa21.14■□□□□ 0.97
GTF3A-204ENST00000438571 ZBTB5O15062 677 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 CYTH3O43739 400 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 CA3P07451 260 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 CHMLP26374 656 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 GRM4Q14833 912 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 SPRED2Q7Z698 418 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 GPKOWQ92917 476 aaPredicted RBP eCLIP21.13■□□□□ 0.97
GTF3A-204ENST00000438571 PIGSQ96S52 555 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 PDCD2LQ9BRP1 358 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 ALG1Q9BT22 464 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 MAF1Q9H063 256 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 CERS4Q9HA82 394 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 MRVI1Q9Y6F6 885 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 TRANK1O15050 2925 aa21.13■□□□□ 0.97
GTF3A-204ENST00000438571 EPOPA6NHQ4 379 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 MYCLP12524 364 aaPredicted RBP21.12■□□□□ 0.97
GTF3A-204ENST00000438571 RFC2P35250 354 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 TCTN1Q2MV58 587 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 TJAP1Q5JTD0 557 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 TMCO2Q7Z6W1 182 aaPredicted RBP21.12■□□□□ 0.97
GTF3A-204ENST00000438571 SESTD1Q86VW0 696 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 RETREG2Q8NC44 543 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 WNT8BQ93098 351 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 FTOQ9C0B1 505 aaKnown RBP eCLIP21.12■□□□□ 0.97
GTF3A-204ENST00000438571 HDAC6Q9UBN7 1215 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 PCDHA1Q9Y5I3 950 aa21.12■□□□□ 0.97
GTF3A-204ENST00000438571 NLRC5Q86WI3 1866 aa21.11■□□□□ 0.97
GTF3A-204ENST00000438571 EIF3JO75822 258 aaKnown RBP21.11■□□□□ 0.97
GTF3A-204ENST00000438571 PSEN2P49810 448 aa21.11■□□□□ 0.97
GTF3A-204ENST00000438571 BFSP2Q13515 415 aa21.11■□□□□ 0.97
GTF3A-204ENST00000438571 HIC1Q14526 733 aa21.11■□□□□ 0.97
GTF3A-204ENST00000438571 PGM5Q15124 567 aa21.11■□□□□ 0.97
GTF3A-204ENST00000438571 MICALL1Q8N3F8 863 aa21.11■□□□□ 0.97
GTF3A-204ENST00000438571 THEGQ9P2T0 379 aa21.11■□□□□ 0.97
GTF3A-204ENST00000438571 GTF2IRD1Q9UHL9 959 aa21.11■□□□□ 0.97
GTF3A-204ENST00000438571 E7EWF7 191 aa21.1■□□□□ 0.97
GTF3A-204ENST00000438571 IFIT3O14879 490 aaKnown RBP21.1■□□□□ 0.97
GTF3A-204ENST00000438571 ACTN1P12814 892 aa21.1■□□□□ 0.97
GTF3A-204ENST00000438571 CASTP20810 708 aaKnown RBP21.1■□□□□ 0.97
GTF3A-204ENST00000438571 ANTXR2P58335 489 aa21.1■□□□□ 0.97
GTF3A-204ENST00000438571 ZNF200P98182 395 aaPredicted RBP21.1■□□□□ 0.97
GTF3A-204ENST00000438571 DGKDQ16760 1214 aa21.1■□□□□ 0.97
GTF3A-204ENST00000438571 TMEM67Q5HYA8 995 aa21.1■□□□□ 0.97
GTF3A-204ENST00000438571 EMID1Q96A84 441 aaPredicted RBP21.1■□□□□ 0.97
GTF3A-204ENST00000438571 SLC9A7Q96T83 725 aa21.1■□□□□ 0.97
GTF3A-204ENST00000438571 RIOX1Q9H6W3 641 aa21.1■□□□□ 0.97
GTF3A-204ENST00000438571 HAS3O00219 553 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 F2P00734 622 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 SP2Q02086 613 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 COL9A3Q14050 684 aaPredicted RBP21.09■□□□□ 0.97
GTF3A-204ENST00000438571 MFSD10Q14728 455 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 HSDL1Q3SXM5 330 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 KRT40Q6A162 431 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 LRRC8DQ7L1W4 858 aa21.09■□□□□ 0.97
GTF3A-204ENST00000438571 DHX37Q8IY37 1157 aaKnown RBP21.09■□□□□ 0.97
GTF3A-204ENST00000438571 PPTC7Q8NI37 304 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms