RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CXorf38Q8TB03 319 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 ZKSCAN4Q969J2 545 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 MKL1Q969V6 931 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 PHACTR1Q9C0D0 580 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 DNAJC18Q9H819 358 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 ELP3Q9H9T3 547 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 FEZ2Q9UHY8 353 aaPredicted RBP7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 RPS6KL1Q9Y6S9 549 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 SSC5DA1L4H1 1573 aa7.2□□□□□ -1.26
ECHDC1-208ENST00000436638 TRPM7Q96QT4 1865 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 CDK5RAP2Q96SN8 1893 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 BAZ2AQ9UIF9 1905 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 B4E1Z4 1266 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 ORC4O43929 436 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 SH3BP5O60239 455 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 PEX14O75381 377 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 BMP4P12644 408 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 AKR1B1P15121 316 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 HSPA6P17066 643 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 PSMA5P28066 241 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 HSPA4P34932 840 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 ATP2B2Q01814 1243 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 PPATQ06203 517 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 SART3Q15020 963 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 FAM47AQ5JRC9 791 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 LDLRAD1Q5T700 205 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 LYPD4Q6UWN0 246 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 SAPCD2Q86UD0 394 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 ERO1BQ86YB8 467 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 NEDD1Q8NHV4 660 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 SREK1Q8WXA9 508 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 PBXIP1Q96AQ6 731 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 OPTNQ96CV9 577 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 HHIPL1Q96JK4 782 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 FEZ1Q99689 392 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 UBAC1Q9BSL1 405 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 C2orf49Q9BVC5 232 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 USP26Q9BXU7 913 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 SH2D4AQ9H788 454 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 KANSL2Q9H9L4 492 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 ZBTB21Q9ULJ3 1066 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 SNCAIPQ9Y6H5 919 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 ZHX2Q9Y6X8 837 aa7.19□□□□□ -1.26
ECHDC1-208ENST00000436638 E7EWF7 191 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 SMIM22K7EJ46 135 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 PPFIA4O75335 1185 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 FGRP09769 529 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 MAPTP10636 758 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 PTPRAP18433 802 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 IGFBP4P22692 258 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 MAP2K3P46734 347 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 CTBSQ01459 385 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 ICA1Q05084 483 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 PPIL2Q13356 520 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 SEPT2Q15019 361 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 CCDC181Q5TID7 509 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 C1orf53Q5VUE5 145 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 BLOC1S2Q6QNY1 142 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 ALDH16A1Q8IZ83 802 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 WNK4Q96J92 1243 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 CLMNQ96JQ2 1002 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 NEK1Q96PY6 1258 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 INCENPQ9NQS7 918 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 NDFIP2Q9NV92 336 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 TMOD4Q9NZQ9 345 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 NEDD4P46934 1319 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 DDX60LQ5H9U9 1706 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 LAMB1P07942 1786 aa7.18□□□□□ -1.26
ECHDC1-208ENST00000436638 MANSC4A6NHS7 340 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 C19orf81C9J6K1 198 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 CXCL11O14625 94 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 IFIT3O14879 490 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 CREB3O43889 395 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 ATG7O95352 703 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 TTLL1O95922 423 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 CELA2BP08218 269 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 ZBTB48P10074 688 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 MCM5P33992 734 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 GTF2A2P52657 109 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 USP14P54578 494 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 TNP2Q05952 138 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 SPP2Q13103 211 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 NOGQ13253 232 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 SNAPC2Q13487 334 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 RRP1BQ14684 758 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 CYP4F22Q6NT55 531 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 GADL1Q6ZQY3 521 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 CCDC84Q86UT8 332 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 RASAL3Q86YV0 1011 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 STAG2Q8N3U4 1231 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 MSL3Q8N5Y2 521 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 ZNF280CQ8ND82 737 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 VTI1AQ96AJ9 217 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 ACDQ96AP0 544 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 CAPNS2Q96L46 248 aa7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 JAKMIP1Q96N16 626 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-208ENST00000436638 TTC14Q96N46 770 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms