RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 COL1A1P02452 1464 aaPredicted RBP18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 TMOD1P28289 359 aa18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 RCSD1Q6JBY9 416 aa18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 PDXDC1Q6P996 788 aa18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 GIMAP7Q8NHV1 300 aa18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 BRIP1Q9BX63 1249 aa18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 OSBPL7Q9BZF2 842 aa18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 TMBIM4Q9HC24 238 aa18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 DDX20Q9UHI6 824 aaKnown RBP18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 DLEC1Q9Y238 1755 aa18.4■□□□□ 0.54
NPC1L1-203ENST00000423141 DNM1LO00429 736 aa18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 SCP2P22307 547 aa18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 EHHADHQ08426 723 aa18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 PREPLQ4J6C6 727 aaPredicted RBP18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 CENPPQ6IPU0 288 aa18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 C7orf25Q9BPX7 421 aa18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 PRDM11Q9NQV5 511 aa18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 MTMR7Q9Y216 660 aa18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.54
NPC1L1-203ENST00000423141 KLRC1P26715 233 aa18.39■□□□□ 0.53
NPC1L1-203ENST00000423141 CHRNDQ07001 517 aa18.39■□□□□ 0.53
NPC1L1-203ENST00000423141 SLC35G1Q2M3R5 365 aa18.39■□□□□ 0.53
NPC1L1-203ENST00000423141 SUSD4Q5VX71 490 aa18.39■□□□□ 0.53
NPC1L1-203ENST00000423141 FAM228AQ86W67 206 aa18.39■□□□□ 0.53
NPC1L1-203ENST00000423141 CCDC114Q96M63 670 aa18.39■□□□□ 0.53
NPC1L1-203ENST00000423141 INPP4AQ96PE3 977 aaPredicted RBP18.39■□□□□ 0.53
NPC1L1-203ENST00000423141 TLR2O60603 784 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 ECHS1P30084 290 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 HSD17B3P37058 310 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 HSPA9P38646 679 aaKnown RBP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 ERVK-9P63128 1117 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 NEDD9Q14511 834 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 UAP1Q16222 522 aaPredicted RBP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 CDC37Q16543 378 aaPredicted RBP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 MAN2A1Q16706 1144 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 CCDC121Q6ZUS5 278 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 CACNA2D4Q7Z3S7 1137 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 DDX42Q86XP3 938 aaKnown RBP eCLIP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 RNF10Q8N5U6 811 aaKnown RBP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 WHAMMQ8TF30 809 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 CCDC47Q96A33 483 aaKnown RBP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 FAM212AQ96EL1 285 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 HLTFQ14527 1009 aaKnown RBP eCLIP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 PLCB4Q15147 1175 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 CEP57Q86XR8 500 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 DZIP3Q86Y13 1208 aaKnown RBP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 GLIS3Q8NEA6 775 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 PACSIN1Q9BY11 444 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 TCP11L1Q9NUJ3 509 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 HAUS2Q9NVX0 235 aa18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.38■□□□□ 0.53
NPC1L1-203ENST00000423141 CYP19A1P11511 503 aaPredicted RBP18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 ELF1P32519 619 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 PTPROQ16827 1216 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 ZNF34Q8IZ26 560 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 N4BP2L2Q92802 583 aaPredicted RBP18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 IQCDQ96DY2 449 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 SLC12A6Q9UHW9 1150 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 ZNF142P52746 1687 aaPredicted RBP18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 NUP98P52948 1817 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 CACNA1SQ13698 1873 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 TSPY2A6NKD2 308 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 C21orf2O43822 256 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 ATP2C2O75185 946 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 ATF3P18847 181 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 TECP42680 631 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 KCNMA1Q12791 1236 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 ENOX2Q16206 610 aaKnown RBP18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 PPP4R3AQ6IN85 833 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 CNNM4Q6P4Q7 775 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 CCDC84Q86UT8 332 aaPredicted RBP18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 MMTAG2Q9BU76 263 aaKnown RBP18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 NHSL1Q5SYE7 1610 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 MYH1P12882 1939 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 GMNCA6NCL1 334 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 H0YGN5 161 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 LETM2Q2VYF4 491 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 CYB5D1Q6P9G0 228 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 DYMQ7RTS9 669 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 FUKQ8N0W3 1084 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 NEUROG2Q9H2A3 272 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 GOLPH3Q9H4A6 298 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 BCCIPQ9P287 314 aaKnown RBP eCLIP18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 RNF14Q9UBS8 474 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 CNOT8Q9UFF9 292 aaKnown RBP18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 NFS1Q9Y697 457 aa18.37■□□□□ 0.53
NPC1L1-203ENST00000423141 SHANK3Q9BYB0 1731 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 ANKRD36CQ5JPF3 1778 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 GOLGA6L7A0A1B0GV03 622 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 GOLGA6L10A6NI86 522 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 DCDC2CA8MYV0 355 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 GCOM1H8Y6P7 765 aaPredicted RBP18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 MYZAPP0CAP1 466 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 CDR1P51861 262 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 ARID5AQ03989 594 aa18.36■□□□□ 0.53
NPC1L1-203ENST00000423141 ZNF844Q08AG5 666 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms