RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 MRVI1Q9Y6F6 885 aa29.54■■■□□ 2.32
SMDT1-202ENST00000422252 BAZ2BQ9UIF8 2168 aaKnown RBP29.54■■■□□ 2.32
SMDT1-202ENST00000422252 CCDC69A6NI79 296 aa29.53■■■□□ 2.32
SMDT1-202ENST00000422252 MMP3P08254 477 aa29.53■■■□□ 2.32
SMDT1-202ENST00000422252 MYCLP12524 364 aaPredicted RBP29.53■■■□□ 2.32
SMDT1-202ENST00000422252 CCL23P55773 120 aa29.53■■■□□ 2.32
SMDT1-202ENST00000422252 PGM5Q15124 567 aa29.53■■■□□ 2.32
SMDT1-202ENST00000422252 PIBF1Q8WXW3 757 aa29.53■■■□□ 2.32
SMDT1-202ENST00000422252 SPZ1Q9BXG8 430 aa29.53■■■□□ 2.32
SMDT1-202ENST00000422252 WNT8AQ9H1J5 351 aa29.53■■■□□ 2.32
SMDT1-202ENST00000422252 PTPN11Q06124 597 aaPredicted RBP29.52■■■□□ 2.32
SMDT1-202ENST00000422252 COL9A3Q14050 684 aaPredicted RBP29.52■■■□□ 2.32
SMDT1-202ENST00000422252 RASIP1Q5U651 963 aa29.52■■■□□ 2.32
SMDT1-202ENST00000422252 CYP2C9P11712 490 aa29.51■■■□□ 2.31
SMDT1-202ENST00000422252 SMARCA1P28370 1054 aa29.51■■■□□ 2.31
SMDT1-202ENST00000422252 LIFRP42702 1097 aa29.51■■■□□ 2.31
SMDT1-202ENST00000422252 VSIG10LQ86VR7 867 aa29.51■■■□□ 2.31
SMDT1-202ENST00000422252 FCHSD1Q86WN1 690 aa29.51■■■□□ 2.31
SMDT1-202ENST00000422252 EMID1Q96A84 441 aaPredicted RBP29.51■■■□□ 2.31
SMDT1-202ENST00000422252 RRP36Q96EU6 259 aaKnown RBP29.51■■■□□ 2.31
SMDT1-202ENST00000422252 LZTS2Q9BRK4 669 aa29.51■■■□□ 2.31
SMDT1-202ENST00000422252 TTYH1Q9H313 450 aaPredicted RBP29.51■■■□□ 2.31
SMDT1-202ENST00000422252 TMEM265A0A087WTH1 108 aa29.5■■■□□ 2.31
SMDT1-202ENST00000422252 CASTP20810 708 aaKnown RBP29.5■■■□□ 2.31
SMDT1-202ENST00000422252 GNAQP50148 359 aa29.5■■■□□ 2.31
SMDT1-202ENST00000422252 RNF20Q5VTR2 975 aa29.5■■■□□ 2.31
SMDT1-202ENST00000422252 SLC17A8Q8NDX2 589 aa29.5■■■□□ 2.31
SMDT1-202ENST00000422252 IL31RAQ8NI17 732 aa29.5■■■□□ 2.31
SMDT1-202ENST00000422252 PPP1R13LQ8WUF5 828 aa29.5■■■□□ 2.31
SMDT1-202ENST00000422252 RGS20O76081 388 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 FGBP02675 491 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 CALM1P0DP23 149 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 CALM2P0DP24 149 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 CALM3P0DP25 149 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 CCND2P30279 289 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 LAMC2Q13753 1193 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 KCNV1Q6PIU1 500 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 HERVK_113Q902F9 699 aa29.49■■■□□ 2.31
SMDT1-202ENST00000422252 SEC63Q9UGP8 760 aaKnown RBP29.49■■■□□ 2.31
SMDT1-202ENST00000422252 CHMP4BP1P59074 171 aa29.48■■■□□ 2.31
SMDT1-202ENST00000422252 DGKDQ16760 1214 aa29.48■■■□□ 2.31
SMDT1-202ENST00000422252 DHX37Q8IY37 1157 aaKnown RBP29.48■■■□□ 2.31
SMDT1-202ENST00000422252 RPUSD2Q8IZ73 545 aaKnown RBP29.48■■■□□ 2.31
SMDT1-202ENST00000422252 SCLYQ96I15 445 aa29.48■■■□□ 2.31
SMDT1-202ENST00000422252 CDX2Q99626 313 aaPredicted RBP29.48■■■□□ 2.31
SMDT1-202ENST00000422252 CDC45O75419 566 aa29.47■■■□□ 2.31
SMDT1-202ENST00000422252 PLEKHA8P1O95397 391 aa29.47■■■□□ 2.31
SMDT1-202ENST00000422252 DNAJB2P25686 324 aa29.47■■■□□ 2.31
SMDT1-202ENST00000422252 SRBD1Q8N5C6 995 aaKnown RBP29.47■■■□□ 2.31
SMDT1-202ENST00000422252 PPTC7Q8NI37 304 aa29.47■■■□□ 2.31
SMDT1-202ENST00000422252 KAT2BQ92831 832 aa29.47■■■□□ 2.31
SMDT1-202ENST00000422252 LRRC2Q9BYS8 371 aa29.47■■■□□ 2.31
SMDT1-202ENST00000422252 MTIF3Q9H2K0 278 aaKnown RBP29.47■■■□□ 2.31
SMDT1-202ENST00000422252 SLC12A7Q9Y666 1083 aa29.47■■■□□ 2.31
SMDT1-202ENST00000422252 RXRAP19793 462 aa29.46■■■□□ 2.31
SMDT1-202ENST00000422252 TGFB3P10600 412 aa29.45■■■□□ 2.31
SMDT1-202ENST00000422252 SESTD1Q86VW0 696 aa29.45■■■□□ 2.31
SMDT1-202ENST00000422252 NEK1Q96PY6 1258 aa29.45■■■□□ 2.31
SMDT1-202ENST00000422252 NOD1Q9Y239 953 aa29.45■■■□□ 2.31
SMDT1-202ENST00000422252 FRMPD4Q14CM0 1322 aa29.45■■■□□ 2.3
SMDT1-202ENST00000422252 CELF3Q5SZQ8 465 aaKnown RBP29.44■■■□□ 2.3
SMDT1-202ENST00000422252 MYSM1Q5VVJ2 828 aa29.44■■■□□ 2.3
SMDT1-202ENST00000422252 OTOP2Q7RTS6 562 aa29.44■■■□□ 2.3
SMDT1-202ENST00000422252 SGMS1Q86VZ5 419 aa29.44■■■□□ 2.3
SMDT1-202ENST00000422252 CMTR1Q8N1G2 835 aaKnown RBP29.44■■■□□ 2.3
SMDT1-202ENST00000422252 CUL5Q93034 780 aa29.44■■■□□ 2.3
SMDT1-202ENST00000422252 ZFP91Q96JP5 570 aaPredicted RBP29.44■■■□□ 2.3
SMDT1-202ENST00000422252 CXXC1Q9P0U4 656 aaPredicted RBP29.44■■■□□ 2.3
SMDT1-202ENST00000422252 GRXCR1A8MXD5 290 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 PITPNM1O00562 1244 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 PTGISQ16647 500 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 RAB11FIP4Q86YS3 637 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 SMARCC2Q8TAQ2 1214 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 TIFAQ96CG3 184 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 VWCEQ96DN2 955 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 CCDC136Q96JN2 1154 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 KATNAL1Q9BW62 490 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 PBX4Q9BYU1 374 aa29.43■■■□□ 2.3
SMDT1-202ENST00000422252 STAM2O75886 525 aa29.42■■■□□ 2.3
SMDT1-202ENST00000422252 GGPS1O95749 300 aa29.42■■■□□ 2.3
SMDT1-202ENST00000422252 PFKMP08237 780 aa29.42■■■□□ 2.3
SMDT1-202ENST00000422252 UBA1P22314 1058 aaKnown RBP29.42■■■□□ 2.3
SMDT1-202ENST00000422252 SP2Q02086 613 aa29.42■■■□□ 2.3
SMDT1-202ENST00000422252 BFSP2Q13515 415 aa29.42■■■□□ 2.3
SMDT1-202ENST00000422252 FANCBQ8NB91 859 aa29.42■■■□□ 2.3
SMDT1-202ENST00000422252 RETREG2Q8NC44 543 aa29.42■■■□□ 2.3
SMDT1-202ENST00000422252 SPATA33Q96N06 139 aa29.42■■■□□ 2.3
SMDT1-202ENST00000422252 PIK3CDO00329 1044 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 SORBS3O60504 671 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 ZNF286BP0CG31 522 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 HOXD8P13378 290 aaPredicted RBP29.41■■■□□ 2.3
SMDT1-202ENST00000422252 PSEN2P49810 448 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 MRPS9P82933 396 aaKnown RBP29.41■■■□□ 2.3
SMDT1-202ENST00000422252 TSGA10IPQ3SY00 556 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 GNPTABQ3T906 1256 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 GDF6Q6KF10 455 aaPredicted RBP29.41■■■□□ 2.3
SMDT1-202ENST00000422252 USP17L6PQ6QN14 398 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 TMTC3Q6ZXV5 915 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 MICU3Q86XE3 530 aa29.41■■■□□ 2.3
SMDT1-202ENST00000422252 MYLIPQ8WY64 445 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms