RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 KAT2BQ92831 832 aa19.71■□□□□ 0.75
UPF3AP3-201ENST00000420996 RMDN3Q96TC7 470 aa19.71■□□□□ 0.75
UPF3AP3-201ENST00000420996 KAT14Q9H8E8 782 aa19.71■□□□□ 0.75
UPF3AP3-201ENST00000420996 TRANK1O15050 2925 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 ARHGEF15O94989 841 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 PARNO95453 639 aaKnown RBP19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 KCNJ6P48051 423 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 GPNMBQ14956 572 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 DGKDQ16760 1214 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 ASPRV1Q53RT3 343 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 CHST3Q7LGC8 479 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 NECAB3Q96P71 396 aaPredicted RBP19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 COG5Q9UP83 839 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 MRPL11Q9Y3B7 192 aaKnown RBP19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 MYH7BA7E2Y1 1941 aa19.7■□□□□ 0.74
UPF3AP3-201ENST00000420996 TLL1O43897 1013 aa19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 SELPP16109 830 aa19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 KCNQ1P51787 676 aa19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 RBL2Q08999 1139 aa19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 QRICH1Q2TAL8 776 aa19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 KRT40Q6A162 431 aa19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 LRRC8DQ7L1W4 858 aa19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 FBXO11Q86XK2 927 aa19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 DHX38Q92620 1227 aaKnown RBP19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 ZSCAN10Q96SZ4 725 aaPredicted RBP19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 DDX41Q9UJV9 622 aaKnown RBP19.69■□□□□ 0.74
UPF3AP3-201ENST00000420996 B4E1Z4 1266 aa19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 EIF3JO75822 258 aaKnown RBP19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 WDR5P61964 334 aaKnown RBP19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 ARHGEF16Q5VV41 709 aa19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 CNKSR3Q6P9H4 555 aa19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 ENAHQ8N8S7 591 aaPredicted RBP19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 EMID1Q96A84 441 aaPredicted RBP19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 JMJD4Q9H9V9 463 aa19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 ZSWIM5Q9P217 1185 aa19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 GTF2IRD1Q9UHL9 959 aa19.68■□□□□ 0.74
UPF3AP3-201ENST00000420996 DHX16O60231 1041 aaKnown RBP19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 CXCL10P02778 98 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 NR3C2P08235 984 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 PARP1P09874 1014 aaKnown RBP19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 CKBP12277 381 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 GRB10Q13322 594 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 LAMC2Q13753 1193 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 CWC27Q6UX04 472 aaKnown RBP19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 SMC5Q8IY18 1101 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 C7orf31Q8N865 590 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 KATNAL1Q9BW62 490 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 OSBPL3Q9H4L5 887 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 VAT1LQ9HCJ6 419 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 HDAC6Q9UBN7 1215 aa19.67■□□□□ 0.74
UPF3AP3-201ENST00000420996 LPXNO60711 386 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 EIF2AK2P19525 551 aaKnown RBP19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 PSEN2P49810 448 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 AAMPQ13685 434 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 PLEKHM2Q8IWE5 1019 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 PPTC7Q8NI37 304 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 ZBED2Q9BTP6 218 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 PXMP2Q9NR77 195 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 DIAPH3Q9NSV4 1193 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 RAPGEFL1Q9UHV5 662 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 MRVI1Q9Y6F6 885 aa19.66■□□□□ 0.74
UPF3AP3-201ENST00000420996 COL4A4P53420 1690 aaPredicted RBP19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 ABHD14A-ACY1A0A1B0GW23 586 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 HAS3O00219 553 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 NBNO60934 754 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 F2P00734 622 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 CFBP00751 764 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 HSD17B4P51659 736 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 PTK7Q13308 1070 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 MFSD10Q14728 455 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 IMMTQ16891 758 aaKnown RBP19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 DHX37Q8IY37 1157 aaKnown RBP19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 HLA-CQ95604 372 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 ALG1Q9BT22 464 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 DSCC1Q9BVC3 393 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 C1QTNF1Q9BXJ1 281 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 AMNQ9BXJ7 453 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 KRT23Q9C075 422 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 RWDD1Q9H446 243 aaPredicted RBP19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 LMCD1Q9NZU5 365 aa19.65■□□□□ 0.74
UPF3AP3-201ENST00000420996 LCHNA4D1U4 455 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 HIP1O00291 1037 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 DEFB103AP81534 67 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 GHRHRQ02643 423 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 KIAA0753Q2KHM9 967 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 SPRED2Q7Z698 418 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 TMCO2Q7Z6W1 182 aaPredicted RBP19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 CHD1LQ86WJ1 897 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 MAP3K20Q9NYL2 800 aaKnown RBP19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 CTNNA3Q9UI47 895 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 BDP1A6H8Y1 2624 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 XIRP2A4UGR9 3374 aa19.64■□□□□ 0.73
UPF3AP3-201ENST00000420996 OPLAHO14841 1288 aa19.63■□□□□ 0.73
UPF3AP3-201ENST00000420996 EFCAB14O75071 495 aa19.63■□□□□ 0.73
UPF3AP3-201ENST00000420996 PPFIA4O75335 1185 aa19.63■□□□□ 0.73
UPF3AP3-201ENST00000420996 HOXD8P13378 290 aaPredicted RBP19.63■□□□□ 0.73
UPF3AP3-201ENST00000420996 IKBKEQ14164 716 aa19.63■□□□□ 0.73
UPF3AP3-201ENST00000420996 KCNV1Q6PIU1 500 aa19.63■□□□□ 0.73
UPF3AP3-201ENST00000420996 SAMD3Q8N6K7 520 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms