RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 NBPF4Q96M43 638 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 TANGO6Q9C0B7 1094 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 LNPKQ9C0E8 428 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 AP5M1Q9H0R1 490 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 PCDHB10Q9UN67 800 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 AKT3Q9Y243 479 aa6.71□□□□□ -1.34
CLK1-203ENST00000409769 A0A1B0GTL3 188 aa6.7□□□□□ -1.34
CLK1-203ENST00000409769 RBL2Q08999 1139 aa6.7□□□□□ -1.34
CLK1-203ENST00000409769 KIAA1211LQ6NV74 962 aa6.7□□□□□ -1.34
CLK1-203ENST00000409769 ADGRG2Q8IZP9 1017 aa6.7□□□□□ -1.34
CLK1-203ENST00000409769 ZNF513Q8N8E2 541 aaPredicted RBP6.7□□□□□ -1.34
CLK1-203ENST00000409769 COPS5Q92905 334 aa6.7□□□□□ -1.34
CLK1-203ENST00000409769 APBA2Q99767 749 aa6.7□□□□□ -1.34
CLK1-203ENST00000409769 MYRFQ9Y2G1 1151 aa6.7□□□□□ -1.34
CLK1-203ENST00000409769 NOP56O00567 594 aaKnown RBP6.69□□□□□ -1.34
CLK1-203ENST00000409769 IQCEQ6IPM2 695 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 ETV3LQ6ZN32 361 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 ANKS3Q6ZW76 656 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 FAM178BQ8IXR5 827 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 BVESQ8NE79 360 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 ZBTB8AQ96BR9 441 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 RXFP1Q9HBX9 757 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 NGRNQ9NPE2 291 aaKnown RBP6.69□□□□□ -1.34
CLK1-203ENST00000409769 FBLN5Q9UBX5 448 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 EMC9Q9Y3B6 208 aa6.69□□□□□ -1.34
CLK1-203ENST00000409769 NESP48681 1621 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 PPP1R11O60927 126 aaPredicted RBP6.68□□□□□ -1.34
CLK1-203ENST00000409769 STK10O94804 968 aaKnown RBP6.68□□□□□ -1.34
CLK1-203ENST00000409769 FUCA1P04066 466 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 NTRK1P04629 796 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 CNR2P34972 360 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 RAB33AQ14088 237 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 HHIPL2Q6UWX4 724 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 GGNQ86UU5 652 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 FERMT3Q86UX7 667 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 ZC3H18Q86VM9 953 aaKnown RBP6.68□□□□□ -1.34
CLK1-203ENST00000409769 ZNF761Q86XN6 746 aaPredicted RBP6.68□□□□□ -1.34
CLK1-203ENST00000409769 SEC14L1Q92503 715 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 GPR20Q99678 358 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 HIRIP3Q9BW71 556 aaPredicted RBP6.68□□□□□ -1.34
CLK1-203ENST00000409769 EPN3Q9H201 632 aa6.68□□□□□ -1.34
CLK1-203ENST00000409769 SPATA6Q9NWH7 488 aaPredicted RBP6.68□□□□□ -1.34
CLK1-203ENST00000409769 SLC6A11P48066 632 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 GTF2A2P52657 109 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 KIAA2012Q0VF49 1180 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 SCRN1Q12765 414 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 FAM26FQ5R3K3 315 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 C6orf15Q6UXA7 325 aaPredicted RBP6.67□□□□□ -1.34
CLK1-203ENST00000409769 FAM124AQ86V42 546 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 MIB1Q86YT6 1006 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 CKAP2LQ8IYA6 745 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 KYQ8NBH2 561 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 PLEKHO2Q8TD55 490 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 HNRNPLLQ8WVV9 542 aaKnown RBP6.67□□□□□ -1.34
CLK1-203ENST00000409769 SREK1Q8WXA9 508 aaKnown RBP6.67□□□□□ -1.34
CLK1-203ENST00000409769 NOX5Q96PH1 765 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 BCAS3Q9H6U6 928 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 CYP26B1Q9NR63 512 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 CLEC1BQ9P126 229 aa6.67□□□□□ -1.34
CLK1-203ENST00000409769 R3HCC1Q9Y3T6 440 aaKnown RBP6.67□□□□□ -1.34
CLK1-203ENST00000409769 KCNH1O95259 989 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 ITGB3P05106 788 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 PLS3P13797 630 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 RPL13P26373 211 aaKnown RBP6.66□□□□□ -1.34
CLK1-203ENST00000409769 MAGEA10P43363 369 aaPredicted RBP6.66□□□□□ -1.34
CLK1-203ENST00000409769 DDR2Q16832 855 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 MROH9Q5TGP6 573 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 LARP1BQ659C4 914 aaKnown RBP6.66□□□□□ -1.34
CLK1-203ENST00000409769 E4F1Q66K89 784 aaPredicted RBP6.66□□□□□ -1.34
CLK1-203ENST00000409769 RIOX2Q8IUF8 465 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 TTC9BQ8N6N2 239 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 TTLL6Q8N841 843 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 MICAL1Q8TDZ2 1067 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 ADAMTS17Q8TE56 1095 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 C11orf84Q9BUA3 381 aaPredicted RBP6.66□□□□□ -1.34
CLK1-203ENST00000409769 MARCH2Q9P0N8 246 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 MSRB2Q9Y3D2 182 aa6.66□□□□□ -1.34
CLK1-203ENST00000409769 C8BP07358 591 aa6.65□□□□□ -1.34
CLK1-203ENST00000409769 SOGA3Q5TF21 947 aa6.65□□□□□ -1.34
CLK1-203ENST00000409769 BORAQ6PGQ7 559 aa6.65□□□□□ -1.34
CLK1-203ENST00000409769 TRIM59Q8IWR1 403 aa6.65□□□□□ -1.34
CLK1-203ENST00000409769 CELF2-AS1Q8N7Q2 184 aa6.65□□□□□ -1.34
CLK1-203ENST00000409769 DDX1Q92499 740 aaKnown RBP6.65□□□□□ -1.34
CLK1-203ENST00000409769 DDX11Q96FC9 970 aa6.65□□□□□ -1.34
CLK1-203ENST00000409769 APEX2Q9UBZ4 518 aa6.65□□□□□ -1.34
CLK1-203ENST00000409769 KIF21AQ7Z4S6 1674 aa6.65□□□□□ -1.35
CLK1-203ENST00000409769 SUSD5O60279 629 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 DDAH1O94760 285 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 GJB6O95452 261 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 PLATP00750 562 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 THBS2P35442 1172 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 MRM1Q6IN84 353 aaKnown RBP6.64□□□□□ -1.35
CLK1-203ENST00000409769 EEPD1Q7L9B9 569 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 LGI4Q8N135 537 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 ZNF669Q96BR6 464 aaPredicted RBP6.64□□□□□ -1.35
CLK1-203ENST00000409769 SAMD11Q96NU1 681 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 GORASP1Q9BQQ3 440 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 NKX2-4Q9H2Z4 354 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 DUSP10Q9Y6W6 482 aa6.64□□□□□ -1.35
CLK1-203ENST00000409769 ABCC8Q09428 1581 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms