RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 RSPH14Q9UHP6 348 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 HYOU1Q9Y4L1 999 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 GYS1P13807 737 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 NAA35Q5VZE5 725 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 GPBP1Q86WP2 473 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 ADSSL1Q8N142 457 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 MYH6P13533 1939 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 TOGARAM1Q9Y4F4 1720 aa14.84□□□□□ -0.03
COL6A2-204ENST00000409416 LGALS16A8MUM7 142 aa14.83□□□□□ -0.03
COL6A2-204ENST00000409416 TRAPPC10P48553 1259 aa14.83□□□□□ -0.03
COL6A2-204ENST00000409416 ZFYVE27Q5T4F4 411 aa14.83□□□□□ -0.03
COL6A2-204ENST00000409416 SPAG5Q96R06 1193 aa14.83□□□□□ -0.03
COL6A2-204ENST00000409416 LACRTQ9GZZ8 138 aa14.83□□□□□ -0.03
COL6A2-204ENST00000409416 PLEKHG2Q9H7P9 1386 aa14.83□□□□□ -0.03
COL6A2-204ENST00000409416 NUP98P52948 1817 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 SPDYE3A6NKU9 549 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 PPIP5K2O43314 1243 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 GH2P01242 217 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 CDR1P51861 262 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 SLC35G1Q2M3R5 365 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 CERKLQ49MI3 558 aaPredicted RBP14.83□□□□□ -0.04
COL6A2-204ENST00000409416 SLFN13Q68D06 897 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 PHLDB2Q86SQ0 1253 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 ADGRF4Q8IZF3 695 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 TEKT1Q969V4 418 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 CWC15Q9P013 229 aaKnown RBP14.83□□□□□ -0.04
COL6A2-204ENST00000409416 CHORDC1Q9UHD1 332 aaPredicted RBP14.83□□□□□ -0.04
COL6A2-204ENST00000409416 REXO2Q9Y3B8 237 aaKnown RBP14.83□□□□□ -0.04
COL6A2-204ENST00000409416 PDE4DIPQ5VU43 2346 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 RASSF7Q02833 373 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 DDR1Q08345 913 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 KIF5AQ12840 1032 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 IRF2BP1Q8IU81 584 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 CYP2W1Q8TAV3 490 aa14.83□□□□□ -0.04
COL6A2-204ENST00000409416 NHEJ1Q9H9Q4 299 aaPredicted RBP14.83□□□□□ -0.04
COL6A2-204ENST00000409416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL6A2-204ENST00000409416 ECM29Q5VYK3 1845 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 MOCS3O95396 460 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 POLR2FP61218 127 aaKnown RBP14.82□□□□□ -0.04
COL6A2-204ENST00000409416 KRT83P78385 493 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 BCCIPQ9P287 314 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL6A2-204ENST00000409416 MYH3P11055 1940 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 SLIT2O94813 1529 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 CHD4Q14839 1912 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 LRRIQ3A6PVS8 624 aaPredicted RBP14.82□□□□□ -0.04
COL6A2-204ENST00000409416 STXBP3O00186 592 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 ICA1Q05084 483 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 NAALADL2Q58DX5 795 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 KCNK18Q7Z418 384 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 DDX12PQ92771 950 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 FAM204AQ9H8W3 233 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 GJA3Q9Y6H8 435 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 ORC4O43929 436 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 PRPF6O94906 941 aaKnown RBP14.82□□□□□ -0.04
COL6A2-204ENST00000409416 EEF2P13639 858 aaKnown RBP14.82□□□□□ -0.04
COL6A2-204ENST00000409416 DNM2P50570 870 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 CTTNQ14247 550 aaKnown RBP14.82□□□□□ -0.04
COL6A2-204ENST00000409416 CSRNP1Q96S65 589 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 HAUS4Q9H6D7 363 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 RGL1Q9NZL6 768 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 LEMD3Q9Y2U8 911 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 ITIH6Q6UXX5 1313 aa14.82□□□□□ -0.04
COL6A2-204ENST00000409416 TRIM66O15016 1216 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 FTCDO95954 541 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 HERVK_113P62684 666 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 DGKZQ13574 1117 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 HLTFQ14527 1009 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL6A2-204ENST00000409416 CT47A1Q5JQC4 288 aaPredicted RBP14.81□□□□□ -0.04
COL6A2-204ENST00000409416 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 CCDC70Q6NSX1 233 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 TBC1D5Q92609 795 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 ESYT3A0FGR9 886 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 RCCD1A6NED2 376 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 ZBTB39O15060 712 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 ABCB4P21439 1286 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 CYP2J2P51589 502 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 AMPD3Q01432 767 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 NID2Q14112 1375 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 ARHGAP44Q17R89 818 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 ARL6IP4Q66PJ3 421 aaKnown RBP14.81□□□□□ -0.04
COL6A2-204ENST00000409416 KRT25Q7Z3Z0 450 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 KLHL7Q8IXQ5 586 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 P2RX5Q93086 422 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 BARHL2Q9NY43 387 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 L1RE1Q9UN81 338 aa14.81□□□□□ -0.04
COL6A2-204ENST00000409416 SMIM23A6NLE4 172 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 ATP2B4P23634 1241 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 KRT27Q7Z3Y8 459 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 DGKHQ86XP1 1220 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 SLF2Q8IX21 1173 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 LARP4BQ92615 738 aaKnown RBP14.8□□□□□ -0.04
COL6A2-204ENST00000409416 RAB34Q9BZG1 259 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 PDGFDQ9GZP0 370 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-204ENST00000409416 GCNT3O95395 438 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 SYCP3Q8IZU3 236 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 TSG101Q99816 390 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 MYMKA6NI61 221 aa14.8□□□□□ -0.04
COL6A2-204ENST00000409416 MYCLP12524 364 aaPredicted RBP14.8□□□□□ -0.04
COL6A2-204ENST00000409416 EEF1GP26641 437 aaKnown RBP14.8□□□□□ -0.04
COL6A2-204ENST00000409416 CERS5Q8N5B7 392 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms