RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PKD2L1Q9P0L9 805 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 DMGDHQ9UI17 866 aaKnown RBP14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 BCS1LQ9Y276 419 aa14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.03□□□□□ -0.16
PPP4R1-202ENST00000400555 MYH8P13535 1937 aa14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 IBSPP21815 317 aaPredicted RBP14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 PRR16Q569H4 304 aa14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 C8orf74Q6P047 294 aa14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 SELENOOQ9BVL4 669 aa14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 PDS5AQ29RF7 1337 aaKnown RBP14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 PKD1L3Q7Z443 1732 aa14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 LAMB4A4D0S4 1761 aa14.02□□□□□ -0.16
PPP4R1-202ENST00000400555 GOLGA6CA6NDK9 693 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 FGFR1OPO95684 399 aaKnown RBP14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 GOLGA6DP0CG33 693 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 UBXN2AP68543 259 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 FAM26FQ5R3K3 315 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 EXOC4Q96A65 974 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 SH3GLB2Q9NR46 395 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 GOLGA6AQ9NYA3 693 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 MYO1AQ9UBC5 1043 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 FLT1P17948 1338 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 MYH7P12883 1935 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 MYH15Q9Y2K3 1946 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 POTEB3A0JP26 581 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 POTECB2RU33 542 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 VAV2P52735 878 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 GRB10Q13322 594 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 KCNB1Q14721 858 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 POTEBQ6S5H4 581 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 ADAT2Q7Z6V5 191 aaKnown RBP14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 ARHGAP20Q9P2F6 1191 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 SLIT2O94813 1529 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 ADAMTSL3P82987 1691 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 NUP188Q5SRE5 1749 aa14.02□□□□□ -0.17
PPP4R1-202ENST00000400555 TUBB2AQ13885 445 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 KIAA0753Q2KHM9 967 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 TRAPPC11Q7Z392 1133 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 MAATS1Q7Z4T9 603 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 TAF4BQ92750 862 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 TUBB2BQ9BVA1 445 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 ZMYND12Q9H0C1 365 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 GLI3P10071 1580 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 C4AP0C0L4 1744 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 TBC1D10BQ4KMP7 808 aaPredicted RBP14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 RDH13Q8NBN7 331 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 ZNF507Q8TCN5 953 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 DNAJC7Q99615 494 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 TRIM31Q9BZY9 425 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 LEMD3Q9Y2U8 911 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 PCDHB13Q9Y5F0 798 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 CLIC2O15247 247 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 KLHL30Q0D2K2 578 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 ZYXQ15942 572 aaKnown RBP14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 SHROOM1Q2M3G4 852 aaPredicted RBP14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 TRIM58Q8NG06 486 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 EHD4Q9H223 541 aa14.01□□□□□ -0.17
PPP4R1-202ENST00000400555 A0A1W2PQC6 194 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 SERPINB2P05120 415 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 MRPL12P52815 198 aaKnown RBP14□□□□□ -0.17
PPP4R1-202ENST00000400555 GUCY2DQ02846 1103 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 MAN2A1Q16706 1144 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 MSANTD4Q8NCY6 345 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 NEDD1Q8NHV4 660 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 FAM76AQ8TAV0 307 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 AK8Q96MA6 479 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 LZTS2Q9BRK4 669 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 PCDHA1Q9Y5I3 950 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 ZSCAN5CA6NGD5 496 aaPredicted RBP14□□□□□ -0.17
PPP4R1-202ENST00000400555 ZNF263O14978 683 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 GDF11O95390 407 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 FGRP09769 529 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 ACTN1P12814 892 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 ADAM9Q13443 819 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 LLGL1Q15334 1064 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 SFMBT2Q5VUG0 894 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 ADGRF4Q8IZF3 695 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 NOX5Q96PH1 765 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 DBNDD1Q9H9R9 158 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 RRP15Q9Y3B9 282 aaKnown RBP14□□□□□ -0.17
PPP4R1-202ENST00000400555 SAMM50Q9Y512 469 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 MYH13Q9UKX3 1938 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 NUP98P52948 1817 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 ZNF142P52746 1687 aaPredicted RBP14□□□□□ -0.17
PPP4R1-202ENST00000400555 POTEFA5A3E0 1075 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 POTEIP0CG38 1075 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 PDHBP11177 359 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 HOXA13P31271 388 aaPredicted RBP14□□□□□ -0.17
PPP4R1-202ENST00000400555 HPDP32754 393 aaPredicted RBP14□□□□□ -0.17
PPP4R1-202ENST00000400555 SLC9C1Q4G0N8 1177 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 GALNT17Q6IS24 598 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 POTEGQ6S5H5 508 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 POTEEQ6S8J3 1075 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 CCDC84Q86UT8 332 aaPredicted RBP14□□□□□ -0.17
PPP4R1-202ENST00000400555 FAM71BQ8TC56 605 aa14□□□□□ -0.17
PPP4R1-202ENST00000400555 KRT12Q99456 494 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms