RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 IFT122Q9HBG6 1241 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 EVLQ9UI08 416 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 NOL7Q9UMY1 257 aaKnown RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 FAM50BQ9Y247 325 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 SNCAIPQ9Y6H5 919 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 PRR33A8MZF0 331 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 HIP1RO75146 1068 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 ZNF865P0CJ78 1059 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 PHKG2P15735 406 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 ZNF280AP59817 542 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 CHAF1AQ13111 956 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 STK3Q13188 491 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 PUM3Q15397 648 aaKnown RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 SAFBQ15424 915 aaKnown RBP eCLIP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 CWF19L2Q2TBE0 894 aaKnown RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 C1QTNF12Q5T7M4 302 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 RASIP1Q5U651 963 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 RUFY4Q6ZNE9 571 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 MMS22LQ6ZRQ5 1243 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 C22orf34Q6ZV56 151 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 EEPD1Q7L9B9 569 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 THAP5Q7Z6K1 395 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 LRRC56Q8IYG6 542 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 CNTD1Q8N815 330 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 C19orf47Q8N9M1 422 aaKnown RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 FBXO15Q8NCQ5 510 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 XAGE3Q8WTP9 111 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 COG1Q8WTW3 980 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 KISS1RQ969F8 398 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 UBE2FQ969M7 185 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 COX4I2Q96KJ9 171 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 ALPK1Q96QP1 1244 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 LRRC27Q9C0I9 530 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 PUS7LQ9H0K6 701 aaKnown RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 NSUN3Q9H649 340 aaKnown RBP6.07□□□□□ -1.44
GABPB1-204ENST00000396464 SEMA3GQ9NS98 782 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 SLAMF8Q9P0V8 285 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 ZSWIM5Q9P217 1185 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 FRMD4BQ9Y2L6 1034 aa6.07□□□□□ -1.44
GABPB1-204ENST00000396464 A0A1W2PQH9 124 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 TMEM253P0C7T8 217 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 IMPDH2P12268 514 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 TYRP1P17643 537 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 TMPRSS15P98073 1019 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 CLCQ05315 142 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 SLBPQ14493 270 aaKnown RBP eCLIP6.06□□□□□ -1.44
GABPB1-204ENST00000396464 GRM3Q14832 879 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 CCDC96Q2M329 555 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 SLC10A6Q3KNW5 377 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 SYDE2Q5VT97 1194 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 DIEXFQ68CQ4 756 aaKnown RBP6.06□□□□□ -1.44
GABPB1-204ENST00000396464 TTBK2Q6IQ55 1244 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 PKN3Q6P5Z2 889 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 C1orf228Q6PIY5 440 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 LRRC47Q8N1G4 583 aaKnown RBP6.06□□□□□ -1.44
GABPB1-204ENST00000396464 CLASRPQ8N2M8 674 aaKnown RBP6.06□□□□□ -1.44
GABPB1-204ENST00000396464 PPM1KQ8N3J5 372 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 BRMS1Q9HCU9 246 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 INTS7Q9NVH2 962 aaKnown RBP6.06□□□□□ -1.44
GABPB1-204ENST00000396464 SAGE1Q9NXZ1 904 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 PHTF1Q9UMS5 762 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 SPEF1Q9Y4P9 236 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 CAPN6Q9Y6Q1 641 aa6.06□□□□□ -1.44
GABPB1-204ENST00000396464 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 CT47B1P0C2W7 299 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 U2AF1L5P0DN76 240 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 CFPP27918 469 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 CAP2P40123 477 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 KIR3DL1P43629 444 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 U2AF1Q01081 240 aaKnown RBP eCLIP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 BIRC3Q13489 604 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 MPP2Q14168 576 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 GALEQ14376 348 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 GBX1Q14549 363 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 KRT72Q14CN4 511 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 NKG7Q16617 165 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 MINDY4Q4G0A6 757 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 PRAMEF13Q5VWM6 474 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 LVRNQ6Q4G3 990 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 TTC6Q86TZ1 520 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 REXO1Q8N1G1 1221 aaKnown RBP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 ABHD4Q8TB40 342 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 PARD3BQ8TEW8 1205 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 SNRNP27Q8WVK2 155 aaKnown RBP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 GATAD2BQ8WXI9 593 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 DDX1Q92499 740 aaKnown RBP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 CNNM2Q9H8M5 875 aa6.05□□□□□ -1.44
GABPB1-204ENST00000396464 DCP1AQ9NPI6 582 aaPredicted RBP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 LUC7L2Q9Y383 392 aaKnown RBP6.05□□□□□ -1.44
GABPB1-204ENST00000396464 PMM2O15305 246 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 BRINP1O60477 761 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 FBXO21O94952 628 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 RHOBTB3O94955 611 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 CST3P01034 146 aaPredicted RBP6.04□□□□□ -1.44
GABPB1-204ENST00000396464 RBP3P10745 1247 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 GRK4P32298 578 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 RENBPP51606 427 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 PTPN11Q06124 597 aaPredicted RBP6.04□□□□□ -1.44
GABPB1-204ENST00000396464 DHCR24Q15392 516 aa6.04□□□□□ -1.44
GABPB1-204ENST00000396464 ALDH1L2Q3SY69 923 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms