RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 RHOBTB3O94955 611 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 TDP2O95551 362 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 IVLP07476 585 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 TNFAIP3P21580 790 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 RPS6KA1Q15418 735 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 LONRF2Q1L5Z9 754 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 CFAP58Q5T655 872 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 SYDE2Q5VT97 1194 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 USP17L6PQ6QN14 398 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 ADGRF4Q8IZF3 695 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 GUF1Q8N442 669 aaKnown RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 SMCR8Q8TEV9 937 aaPredicted RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 ANKRD7Q92527 254 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 PLVAPQ9BX97 442 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 BCCIPQ9P287 314 aaKnown RBP eCLIP7.23□□□□□ -1.25
BDNF-203ENST00000395978 RABGAP1Q9Y3P9 1069 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 ATP6V0A2Q9Y487 856 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 ABCC6O95255 1503 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 DDX39AO00148 427 aaKnown RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 SEC31AO94979 1220 aaKnown RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 RNASE9P60153 205 aaKnown RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 CACNB1Q02641 598 aaPredicted RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 AP3B2Q13367 1082 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 PDIA5Q14554 519 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 GBP6Q6ZN66 633 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 NIM1KQ8IY84 436 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 DCAF4Q8WV16 495 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 CTNNBL1Q8WYA6 563 aaPredicted RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 TRERF1Q96PN7 1200 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 MAD2L2Q9UI95 211 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 ATRNO75882 1429 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 NHSL1Q5SYE7 1610 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 CLRN2A0PK11 232 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 EIF4A3P38919 411 aaKnown RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 STAT1P42224 750 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 SARSP49591 514 aaKnown RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 FXR1P51114 621 aaKnown RBP eCLIP7.23□□□□□ -1.25
BDNF-203ENST00000395978 ZNF543Q08ER8 600 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 EXOC3L4Q17RC7 722 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 EARS2Q5JPH6 523 aaKnown RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 UTP14CQ5TAP6 766 aaKnown RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 ZNF772Q68DY9 489 aaPredicted RBP7.23□□□□□ -1.25
BDNF-203ENST00000395978 MAEAQ7L5Y9 396 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 FAM178BQ8IXR5 827 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 IFT20Q8IY31 132 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 DAGLBQ8NCG7 672 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 RAD54LQ92698 747 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 ITIH6Q6UXX5 1313 aa7.23□□□□□ -1.25
BDNF-203ENST00000395978 FAM196BA6NMK8 535 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 SMIM22K7EJ46 135 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 CEP104O60308 925 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 PNMA6AP0CW24 399 aaPredicted RBP7.22□□□□□ -1.25
BDNF-203ENST00000395978 PDHBP11177 359 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 EEF2P13639 858 aaKnown RBP7.22□□□□□ -1.25
BDNF-203ENST00000395978 ZNF18P17022 549 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 SMTNP53814 917 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 QRICH1Q2TAL8 776 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 NT5DC1Q5TFE4 455 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 LRCH2Q5VUJ6 765 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 NSMFQ6X4W1 530 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 GJA10Q969M2 543 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 ESYT2A0FGR8 921 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 CCDC169A6NNP5 214 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 MEIS1O00470 390 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 GH2P01242 217 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 FCER1AP12319 257 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 MYCLP12524 364 aaPredicted RBP7.22□□□□□ -1.25
BDNF-203ENST00000395978 CD44P16070 742 aaKnown RBP7.22□□□□□ -1.25
BDNF-203ENST00000395978 RASSF7Q02833 373 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 ANKRD40Q6AI12 368 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 RCSD1Q6JBY9 416 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 SND1Q7KZF4 910 aaKnown RBP eCLIP7.22□□□□□ -1.25
BDNF-203ENST00000395978 PROM2Q8N271 834 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 GIMAP8Q8ND71 665 aaPredicted RBP7.22□□□□□ -1.25
BDNF-203ENST00000395978 FAM76AQ8TAV0 307 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 C7orf25Q9BPX7 421 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 IRX2Q9BZI1 471 aaPredicted RBP7.22□□□□□ -1.25
BDNF-203ENST00000395978 FAM107BQ9H098 131 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 LARSQ9P2J5 1176 aaKnown RBP7.22□□□□□ -1.25
BDNF-203ENST00000395978 F5H6K3 240 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 BUB1O43683 1085 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 TADA3O75528 432 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 STAT2P52630 851 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 KLRC3Q07444 240 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 STK4Q13043 487 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 TTBK2Q6IQ55 1244 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 RAD9BQ6WBX8 426 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 MIER3Q7Z3K6 550 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 KRT26Q7Z3Y9 468 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 TAX1BP1Q86VP1 789 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 FNBP4Q8N3X1 1017 aaPredicted RBP7.22□□□□□ -1.25
BDNF-203ENST00000395978 RDH13Q8NBN7 331 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 GOLGA5Q8TBA6 731 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 GDAP1L1Q96MZ0 367 aa7.22□□□□□ -1.25
BDNF-203ENST00000395978 L2HGDHQ9H9P8 463 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms