RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 GAS7O60861 476 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 GATA4P43694 442 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 LSAMPQ13449 338 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 ABCB5Q2M3G0 1257 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 OTOP1Q7RTM1 612 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 CREG2Q8IUH2 290 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 WDR75Q8IWA0 830 aaKnown RBP6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 METTL22Q9BUU2 404 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 CDH19Q9H159 772 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 SMURF1Q9HCE7 757 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 OXSMQ9NWU1 459 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 TIMM13Q9Y5L4 95 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 SSU72P8A0A1W2PR75 194 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 FZD9O00144 591 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 TGM5O43548 720 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 PPP1R11O60927 126 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 APPP05067 770 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 ITGB2P05107 769 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 LACTBP83111 547 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 INSM1Q01101 510 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 SART3Q15020 963 aaKnown RBP6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 FAM47CQ5HY64 1035 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 CYP2R1Q6VVX0 501 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 ARHGAP27Q6ZUM4 889 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 TMPRSS7Q7RTY8 843 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 Q8N1Y9 231 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 CLRN3Q8NCR9 226 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 KCNJ15Q99712 375 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 MENTQ9BUN1 341 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 JAM3Q9BX67 310 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 OSBPL1AQ9BXW6 950 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 ZKSCAN5Q9Y2L8 839 aa6.74□□□□□ -1.33
HMGB1P10-201ENST00000395823 TCRBV5S4A2TA0A5A2 114 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 PRC1O43663 620 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 MYO1BO43795 1136 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 ABLIM3O94929 683 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 FBXO21O94952 628 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 AMY2AP04746 511 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 PDE6AP16499 860 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 AMY2BP19961 511 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 ENDOUP21128 410 aaKnown RBP6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 IARSP41252 1262 aaKnown RBP6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 JAM2P57087 298 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 RPL11P62913 178 aaKnown RBP6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 EGR3Q06889 387 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 IFI16Q16666 785 aaKnown RBP6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 HABP4Q5JVS0 413 aaKnown RBP6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 WAPLQ7Z5K2 1190 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 ZBTB46Q86UZ6 589 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 CCDC146Q8IYE0 955 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 NAT16Q8N8M0 369 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 RELTQ969Z4 430 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 FCRL2Q96LA5 508 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 G6PC3Q9BUM1 346 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 AASDHPPTQ9NRN7 309 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 GEMIN8Q9NWZ8 242 aaKnown RBP6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 CLDND1Q9NY35 253 aa6.73□□□□□ -1.33
HMGB1P10-201ENST00000395823 DVL2O14641 736 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 PRPF3O43395 683 aaKnown RBP6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 TBC1D8O95759 1140 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 ZBTB48P10074 688 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 FSTP19883 344 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 FPR2P25090 351 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 RPL10P27635 214 aaKnown RBP6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 KPNA1P52294 538 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 ST5P78524 1137 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 HDGFL2Q7Z4V5 671 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 C14orf80Q86SX3 495 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 CHPFQ8IZ52 775 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 C2orf69Q8N8R5 385 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 NETO1Q8TDF5 533 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 SLC5A5Q92911 643 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 RHOBTB2Q9BYZ6 727 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 ATG3Q9NT62 314 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 CATSPERZQ9NTU4 200 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 ZC3H7BQ9UGR2 993 aaKnown RBP6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 EBF1Q9UH73 591 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 SNX11Q9Y5W9 270 aa6.72□□□□□ -1.33
HMGB1P10-201ENST00000395823 WTIPA6NIX2 430 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 GNALP38405 381 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 GRIK1P39086 918 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 GSK3AP49840 483 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 OCRLQ01968 901 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 OSTM1Q86WC4 334 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 ZDHHC13Q8IUH4 622 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 PASD1Q8IV76 773 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 EFHBQ8N7U6 833 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 HHIPL1Q96JK4 782 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 CHAMP1Q96JM3 812 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 MS4A5Q9H3V2 200 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 BTG4Q9NY30 223 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 GULP1Q9UBP9 304 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 FBLN5Q9UBX5 448 aa6.71□□□□□ -1.34
HMGB1P10-201ENST00000395823 TMEM265A0A087WTH1 108 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 E2F8A0AVK6 867 aa6.7□□□□□ -1.34
HMGB1P10-201ENST00000395823 PRR19A6NJB7 356 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms