RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 ARID5AQ03989 594 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 HLTFQ14527 1009 aaKnown RBP eCLIP18.14■□□□□ 0.49
CNP-201ENST00000393888 SUSD4Q5VX71 490 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 SPATS2Q86XZ4 545 aaKnown RBP18.14■□□□□ 0.49
CNP-201ENST00000393888 DZIP3Q86Y13 1208 aaKnown RBP18.14■□□□□ 0.49
CNP-201ENST00000393888 GIMAP7Q8NHV1 300 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 ZNF384Q8TF68 577 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 BAP1Q92560 729 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 TANGO6Q9C0B7 1094 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 CCSER1Q9C0I3 900 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 FLT1P17948 1338 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 RAD51CO43502 376 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 FAM107AO95990 144 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 CHRNDQ07001 517 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 GLE1Q53GS7 698 aaKnown RBP18.14■□□□□ 0.49
CNP-201ENST00000393888 DYMQ7RTS9 669 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 HEATR3Q7Z4Q2 680 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 DDX42Q86XP3 938 aaKnown RBP eCLIP18.14■□□□□ 0.49
CNP-201ENST00000393888 CCDC47Q96A33 483 aaKnown RBP18.14■□□□□ 0.49
CNP-201ENST00000393888 CYFIP2Q96F07 1278 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
CNP-201ENST00000393888 CHUKO15111 745 aa18.13■□□□□ 0.49
CNP-201ENST00000393888 TECP42680 631 aa18.13■□□□□ 0.49
CNP-201ENST00000393888 QPCTQ16769 361 aa18.13■□□□□ 0.49
CNP-201ENST00000393888 CEP57Q86XR8 500 aa18.13■□□□□ 0.49
CNP-201ENST00000393888 CCDC114Q96M63 670 aa18.13■□□□□ 0.49
CNP-201ENST00000393888 CHRM1P11229 460 aaPredicted RBP18.13■□□□□ 0.49
CNP-201ENST00000393888 SF3A3Q12874 501 aaKnown RBP eCLIP18.13■□□□□ 0.49
CNP-201ENST00000393888 ARAP2Q8WZ64 1704 aa18.13■□□□□ 0.49
CNP-201ENST00000393888 PJA2O43164 708 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 RASSF9O75901 435 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 SCP2P22307 547 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 LRRC41Q15345 812 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 ASTE1Q2TB18 679 aaPredicted RBP18.12■□□□□ 0.49
CNP-201ENST00000393888 LETM2Q2VYF4 491 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 YTHDF3Q7Z739 585 aaKnown RBP18.12■□□□□ 0.49
CNP-201ENST00000393888 GLIS3Q8NEA6 775 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 CPVLQ9H3G5 476 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 GOLPH3Q9H4A6 298 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 TCP11L1Q9NUJ3 509 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 CEP83Q9Y592 693 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 CICQ96RK0 1608 aaPredicted RBP18.12■□□□□ 0.49
CNP-201ENST00000393888 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
CNP-201ENST00000393888 ECM2O94769 699 aaPredicted RBP18.12■□□□□ 0.49
CNP-201ENST00000393888 MYL1P05976 194 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 KLRC1P26715 233 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 MMP14P50281 582 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 SMTNP53814 917 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 HGSNATQ68CP4 663 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 PDXDC1Q6P996 788 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 DNAAF5Q86Y56 855 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 PACSIN1Q9BY11 444 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 KANSL2Q9H9L4 492 aa18.12■□□□□ 0.49
CNP-201ENST00000393888 DNM1LO00429 736 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 CYP19A1P11511 503 aaPredicted RBP18.11■□□□□ 0.49
CNP-201ENST00000393888 IGHMBP2P38935 993 aaKnown RBP18.11■□□□□ 0.49
CNP-201ENST00000393888 RCSD1Q6JBY9 416 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 C6orf89Q6UWU4 347 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 CCDC121Q6ZUS5 278 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.11■□□□□ 0.49
CNP-201ENST00000393888 HAUS2Q9NVX0 235 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 DONSONQ9NYP3 566 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 DDX20Q9UHI6 824 aaKnown RBP18.11■□□□□ 0.49
CNP-201ENST00000393888 HMGB1P1B2RPK0 211 aaPredicted RBP18.11■□□□□ 0.49
CNP-201ENST00000393888 M0R2N6 131 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 SLC35G1Q2M3R5 365 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 CD302Q8IX05 232 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 C7orf25Q9BPX7 421 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 PAGR1Q9BTK6 254 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 BRIP1Q9BX63 1249 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 OSBPL7Q9BZF2 842 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 TMBIM4Q9HC24 238 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.11■□□□□ 0.49
CNP-201ENST00000393888 SLIT2O94813 1529 aa18.11■□□□□ 0.49
CNP-201ENST00000393888 GOLGA6L7A0A1B0GV03 622 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 HSD17B3P37058 310 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 CDC37Q16543 378 aaPredicted RBP18.1■□□□□ 0.49
CNP-201ENST00000393888 MAN2A1Q16706 1144 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 CENPPQ6IPU0 288 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 N4BP2L2Q92802 583 aaPredicted RBP18.1■□□□□ 0.49
CNP-201ENST00000393888 SCLT1Q96NL6 688 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 NUP98P52948 1817 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 GOLGA6L10A6NI86 522 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 TLR2O60603 784 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 FGRP09769 529 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 CDR1P51861 262 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 ERVK-9P63128 1117 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 KCNMA1Q12791 1236 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 E2F5Q15329 346 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 ODF2Q5BJF6 829 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 CNNM4Q6P4Q7 775 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 MREGQ8N565 214 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 A1CFQ9NQ94 594 aaKnown RBP18.1■□□□□ 0.49
CNP-201ENST00000393888 MCM8Q9UJA3 840 aa18.1■□□□□ 0.49
CNP-201ENST00000393888 MYH1P12882 1939 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 GOLGA8HP0CJ92 632 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 CHADLQ6NUI6 762 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms