RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 DDX19AQ9NUU7 478 aaKnown RBP21.21■□□□□ 0.99
CCDC50-202ENST00000392456 PFKFB1P16118 471 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 PTPREP23469 700 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 KRI1Q8N9T8 703 aaKnown RBP21.2■□□□□ 0.98
CCDC50-202ENST00000392456 JPH2Q9BR39 696 aaPredicted RBP21.2■□□□□ 0.98
CCDC50-202ENST00000392456 VCPKMTQ9H867 229 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 C6orf50Q9HD87 102 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 CCDC194A0A1B0GVG4 234 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 PTGDRQ13258 359 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 SYDE2Q5VT97 1194 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 GALNT17Q6IS24 598 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 TNMDQ9H2S6 317 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 ADARB2Q9NS39 739 aaKnown RBP21.2■□□□□ 0.98
CCDC50-202ENST00000392456 FBXO28Q9NVF7 368 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 IRAK4Q9NWZ3 460 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 VPS18Q9P253 973 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 SMCHD1A6NHR9 2005 aa21.2■□□□□ 0.98
CCDC50-202ENST00000392456 CTNND1O60716 968 aaKnown RBP21.19■□□□□ 0.98
CCDC50-202ENST00000392456 UBE2SQ16763 222 aa21.19■□□□□ 0.98
CCDC50-202ENST00000392456 ZNF483Q8TF39 744 aaPredicted RBP21.19■□□□□ 0.98
CCDC50-202ENST00000392456 CCDC12Q8WUD4 166 aaPredicted RBP21.19■□□□□ 0.98
CCDC50-202ENST00000392456 PRR12Q9ULL5 1215 aa21.19■□□□□ 0.98
CCDC50-202ENST00000392456 PPFIA4O75335 1185 aa21.19■□□□□ 0.98
CCDC50-202ENST00000392456 LMOD1P29536 600 aaPredicted RBP21.19■□□□□ 0.98
CCDC50-202ENST00000392456 GNA11P29992 359 aa21.19■□□□□ 0.98
CCDC50-202ENST00000392456 WRNIP1Q96S55 665 aa21.19■□□□□ 0.98
CCDC50-202ENST00000392456 TRIM6Q9C030 488 aaPredicted RBP21.19■□□□□ 0.98
CCDC50-202ENST00000392456 GOPCQ9HD26 462 aa21.19■□□□□ 0.98
CCDC50-202ENST00000392456 PCDHA1Q9Y5I3 950 aa21.19■□□□□ 0.98
CCDC50-202ENST00000392456 SSC5DA1L4H1 1573 aa21.19■□□□□ 0.98
CCDC50-202ENST00000392456 RESP18Q5W5W9 173 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 BTNL9Q6UXG8 535 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 ANKRD23Q86SG2 305 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 ARFGAP3Q9NP61 516 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 SRPRBQ9Y5M8 271 aaKnown RBP21.18■□□□□ 0.98
CCDC50-202ENST00000392456 ESYT2A0FGR8 921 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 ADM5C9JUS6 153 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 EDIL3O43854 480 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 CUTAO60888 179 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 IL17AQ16552 155 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 N4BP2L2Q92802 583 aaPredicted RBP21.18■□□□□ 0.98
CCDC50-202ENST00000392456 CSRNP2Q9H175 543 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 SYNPO2Q9UMS6 1093 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 HPSEQ9Y251 543 aa21.18■□□□□ 0.98
CCDC50-202ENST00000392456 A0A087WWV3 80 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 EFCAB8A8MWE9 144 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 ZNF202O95125 648 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 CRYMQ14894 314 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 USH1GQ495M9 461 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 ANO6Q4KMQ2 910 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 FBXW10Q5XX13 1052 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 REXO1Q8N1G1 1221 aaKnown RBP21.17■□□□□ 0.98
CCDC50-202ENST00000392456 C4orf32Q8N8J7 132 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 CCDC26Q8TAB7 109 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 ZNF112Q9UJU3 913 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 TRAPPC10P48553 1259 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 ADCY7P51828 1080 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 STAT2P52630 851 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 SH3GL3Q99963 347 aa21.17■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L15C9J2P7 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L13C9JLJ4 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L11C9JVI0 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L18D6R9N7 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L22D6RA61 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L17D6RBQ6 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L19D6RCP7 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L20D6RJB6 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 hCG_1984214I3L0E3 225 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 CCNHP51946 323 aaPredicted RBP21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L24Q0WX57 530 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 C1QTNF12Q5T7M4 302 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 USP17L6PQ6QN14 398 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 ZNF713Q8N859 430 aaPredicted RBP21.16■□□□□ 0.98
CCDC50-202ENST00000392456 KIFC2Q96AC6 838 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 TMEM60Q9H2L4 133 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 ATAD5Q96QE3 1844 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 MAP2K7O14733 419 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 KINO60870 393 aaKnown RBP21.16■□□□□ 0.98
CCDC50-202ENST00000392456 ATP2C1P98194 919 aaPredicted RBP21.16■□□□□ 0.98
CCDC50-202ENST00000392456 DCAF15Q66K64 600 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 RBM43Q6ZSC3 357 aaKnown RBP21.16■□□□□ 0.98
CCDC50-202ENST00000392456 TBCKQ8TEA7 893 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 RIC8AQ9NPQ8 531 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 CEP131Q9UPN4 1083 aa21.16■□□□□ 0.98
CCDC50-202ENST00000392456 RTN2O75298 545 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 FAM177A1Q8N128 213 aaPredicted RBP21.15■□□□□ 0.98
CCDC50-202ENST00000392456 KLRG1Q96E93 195 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 EPSTI1Q96J88 318 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 P2RX7Q99572 595 aaKnown RBP21.15■□□□□ 0.98
CCDC50-202ENST00000392456 PSTPIP2Q9H939 334 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 TUBB4AP04350 444 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 MYBL2P10244 700 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 LIG3P49916 1009 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 SPP2Q13103 211 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 MTMR2Q13614 643 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 LETM2Q2VYF4 491 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 DPY19L2Q6NUT2 758 aa21.15■□□□□ 0.98
CCDC50-202ENST00000392456 VWA3AA6NCI4 1184 aa21.14■□□□□ 0.98
CCDC50-202ENST00000392456 MAFGO15525 162 aa21.14■□□□□ 0.98
CCDC50-202ENST00000392456 CLK2P49760 499 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms