RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 NUP153P49790 1475 aaKnown RBP6.89□□□□□ -1.31
PMS1-202ENST00000374826 CDK13Q14004 1512 aaKnown RBP6.89□□□□□ -1.31
PMS1-202ENST00000374826 MAP3K4Q9Y6R4 1608 aa6.89□□□□□ -1.31
PMS1-202ENST00000374826 MYO5CQ9NQX4 1742 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 A0A1W2PQH9 124 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 LOC105371045A0A1W2PR82 267 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 ITGB3P05106 788 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 PMLP29590 882 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 CNR2P34972 360 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 TCEAL1Q15170 157 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 GNPTABQ3T906 1256 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 ZDHHC15Q96MV8 337 aa6.88□□□□□ -1.31
PMS1-202ENST00000374826 PHAXQ9H814 394 aaKnown RBP6.88□□□□□ -1.31
PMS1-202ENST00000374826 SPATA6Q9NWH7 488 aaPredicted RBP6.88□□□□□ -1.31
PMS1-202ENST00000374826 ASXL2Q76L83 1435 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 CBFA2T2O43439 604 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 PPP1R11O60927 126 aaPredicted RBP6.87□□□□□ -1.31
PMS1-202ENST00000374826 ERCC5P28715 1186 aaPredicted RBP6.87□□□□□ -1.31
PMS1-202ENST00000374826 SARSP49591 514 aaKnown RBP6.87□□□□□ -1.31
PMS1-202ENST00000374826 PPP2R5EQ16537 467 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 EEF1DP3Q658K8 133 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 RCSD1Q6JBY9 416 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 LZTR1Q8N653 840 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 CPA5Q8WXQ8 436 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 NOX5Q96PH1 765 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 RBM15Q96T37 977 aaKnown RBP eCLIP6.87□□□□□ -1.31
PMS1-202ENST00000374826 STRIP2Q9ULQ0 834 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 KIF14Q15058 1648 aa6.87□□□□□ -1.31
PMS1-202ENST00000374826 ABCC10Q5T3U5 1492 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 WDR7Q9Y4E6 1490 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 FMN1Q68DA7 1419 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 TCF3P15923 654 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 GJA9P57773 515 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 PPP2R5DQ14738 602 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 SLC9A5Q14940 896 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 CABP7Q86V35 215 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 SMARCC2Q8TAQ2 1214 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 ZNF428Q96B54 188 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 PEX11GQ96HA9 241 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 HAUS7Q99871 368 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 MCMBPQ9BTE3 642 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 PCDHB10Q9UN67 800 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 ABCA9Q8IUA7 1624 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 GLI2P10070 1586 aa6.86□□□□□ -1.31
PMS1-202ENST00000374826 ATP10BO94823 1461 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 FYCO1Q9BQS8 1478 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 CDC42BPAQ5VT25 1732 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 AURKAO14965 403 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 ATF4P18848 351 aaPredicted RBP6.85□□□□□ -1.31
PMS1-202ENST00000374826 ADAM17P78536 824 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 CACNB2Q08289 660 aaPredicted RBP6.85□□□□□ -1.31
PMS1-202ENST00000374826 HEATR6Q6AI08 1181 aaKnown RBP6.85□□□□□ -1.31
PMS1-202ENST00000374826 NETO2Q8NC67 525 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 CAPN10Q9HC96 672 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 SMPD4Q9NXE4 827 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 NTMQ9P121 344 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 WHRNQ9P202 907 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 FBLN5Q9UBX5 448 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 RWDD3Q9Y3V2 267 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 TTC37Q6PGP7 1564 aa6.85□□□□□ -1.31
PMS1-202ENST00000374826 EPRSP07814 1512 aaKnown RBP6.85□□□□□ -1.31
PMS1-202ENST00000374826 ZBTB7AO95365 584 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 CASP7P55210 303 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 TTLL7Q6ZT98 887 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 ZNF761Q86XN6 746 aaPredicted RBP6.84□□□□□ -1.31
PMS1-202ENST00000374826 FAM169BQ8N8A8 192 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 ANAPC16Q96DE5 110 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 MTA3Q9BTC8 594 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 KLHL25Q9H0H3 589 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 GBP3Q9H0R5 595 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 NUDT5Q9UKK9 219 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 CDC42BPBQ9Y5S2 1711 aa6.84□□□□□ -1.31
PMS1-202ENST00000374826 VAMP4O75379 141 aa6.83□□□□□ -1.32
PMS1-202ENST00000374826 VHLLQ6RSH7 139 aa6.83□□□□□ -1.32
PMS1-202ENST00000374826 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
PMS1-202ENST00000374826 ADCY4Q8NFM4 1077 aa6.83□□□□□ -1.32
PMS1-202ENST00000374826 ZBTB8AQ96BR9 441 aa6.83□□□□□ -1.32
PMS1-202ENST00000374826 CASKIN1Q8WXD9 1431 aa6.83□□□□□ -1.32
PMS1-202ENST00000374826 MAGI3Q5TCQ9 1506 aa6.82□□□□□ -1.32
PMS1-202ENST00000374826 CCDC18Q5T9S5 1454 aa6.82□□□□□ -1.32
PMS1-202ENST00000374826 EPHX1P07099 455 aa6.82□□□□□ -1.32
PMS1-202ENST00000374826 RBM25P49756 843 aaKnown RBP6.82□□□□□ -1.32
PMS1-202ENST00000374826 ADAT2Q7Z6V5 191 aaKnown RBP6.82□□□□□ -1.32
PMS1-202ENST00000374826 VPS37DQ86XT2 251 aa6.82□□□□□ -1.32
PMS1-202ENST00000374826 FGD4Q96M96 766 aa6.82□□□□□ -1.32
PMS1-202ENST00000374826 KDM6BO15054 1643 aa6.82□□□□□ -1.32
PMS1-202ENST00000374826 PREX2Q70Z35 1606 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 C2orf71A6NGG8 1288 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 TNFRSF1AP19438 455 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 SEPHS1P49903 392 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 DPY19L1Q2PZI1 675 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 KIAA1211LQ6NV74 962 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 CPNE8Q86YQ8 564 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 ADAMTS17Q8TE56 1095 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 USP33Q8TEY7 942 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 DDX11Q96FC9 970 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 GULP1Q9UBP9 304 aa6.81□□□□□ -1.32
PMS1-202ENST00000374826 TIAM1Q13009 1591 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms