RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.48
CXCL12-203ENST00000374429 AMPD3Q01432 767 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 BHMT2Q9H2M3 363 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 SUGCTQ9HAC7 445 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 DNAH12Q6ZR08 3092 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 CRYBG1Q9Y4K1 1723 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 CICQ96RK0 1608 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-203ENST00000374429 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 A0A1W2PRG0 241 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 RSPH10B2B2RC85 870 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 ZBTB5O15062 677 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 RSPH10BP0C881 870 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 DPEP1P16444 411 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 ERCC5P28715 1186 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-203ENST00000374429 SH3BP5LQ7L8J4 393 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 CCDC42Q96M95 316 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 TSPYL1Q9H0U9 437 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 PANK4Q9NVE7 773 aa12.02□□□□□ -0.49
CXCL12-203ENST00000374429 TMEM150BA6NC51 233 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 EGFRP00533 1210 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 E2F4Q16254 413 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 CTAGE1Q96RT6 745 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-203ENST00000374429 FANCGO15287 622 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 RRP1BQ14684 758 aaKnown RBP12.01□□□□□ -0.49
CXCL12-203ENST00000374429 REXO1L1PQ8IX06 675 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 ZNF526Q8TF50 670 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-203ENST00000374429 ANO3Q9BYT9 981 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 GOLPH3Q9H4A6 298 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 ASTN2O75129 1339 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-203ENST00000374429 SHANK3Q9BYB0 1731 aa12.01□□□□□ -0.49
CXCL12-203ENST00000374429 GCNT3O95395 438 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 BMP3P12645 472 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 C4orf32Q8N8J7 132 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 P2RX5Q93086 422 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 BPIFA3Q9BQP9 254 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 MFAP3LO75121 409 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 ZNF18P17022 549 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 TRAPPC10P48553 1259 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 ERVK-24P63145 666 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 TMCO3Q6UWJ1 677 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 PODNQ7Z5L7 613 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 GSPT2Q8IYD1 628 aaKnown RBP12□□□□□ -0.49
CXCL12-203ENST00000374429 ZNF185O15231 689 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 CYP2J2P51589 502 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 KCNA1Q09470 495 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 GRB10Q13322 594 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 ASPRV1Q53RT3 343 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 JDP2Q8WYK2 163 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 EHD2Q9NZN4 543 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
CXCL12-203ENST00000374429 A0A1B0GTH6 734 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 POLR2FP61218 127 aaKnown RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 SLC20A2Q08357 652 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 CNGA4Q8IV77 575 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 TRIML1Q8N9V2 468 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 AGBL1Q96MI9 1066 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 ZNF341Q9BYN7 854 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 ABHD10Q9NUJ1 306 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 USP20Q9Y2K6 914 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 EPN1Q9Y6I3 576 aaPredicted RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 MYH3P11055 1940 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 YDJCA8MPS7 323 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 EPHB6O15197 1021 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 STX10O60499 249 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 FGRP09769 529 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 EIF2AK2P19525 551 aaKnown RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 NOP2P46087 812 aaKnown RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 CDR1P51861 262 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 ARHGAP4P98171 946 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 SPA17Q15506 151 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 N4BP2Q86UW6 1770 aaPredicted RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 ZNF668Q96K58 619 aaPredicted RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 FAM84AQ96KN4 292 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 RWDD2AQ9UIY3 292 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 PACSIN2Q9UNF0 486 aaPredicted RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 ADGRG1Q9Y653 693 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 PLA2G4BP0C869 781 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 ACTN1P12814 892 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 PSEN1P49768 467 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 EEPD1Q7L9B9 569 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 ADSSL1Q8N142 457 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 MYCT1Q8N699 235 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 TTLL6Q8N841 843 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 KIAA0895Q8NCT3 520 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 MMTAG2Q9BU76 263 aaKnown RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 SPZ1Q9BXG8 430 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 CHORDC1Q9UHD1 332 aaPredicted RBP11.99□□□□□ -0.49
CXCL12-203ENST00000374429 RSPH14Q9UHP6 348 aa11.99□□□□□ -0.49
CXCL12-203ENST00000374429 CTAGE9A4FU28 777 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 ZC2HC1CQ53FD0 456 aaPredicted RBP11.98□□□□□ -0.49
CXCL12-203ENST00000374429 FAM26FQ5R3K3 315 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 ARL6IP4Q66PJ3 421 aaKnown RBP11.98□□□□□ -0.49
CXCL12-203ENST00000374429 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 ADAT2Q7Z6V5 191 aaKnown RBP11.98□□□□□ -0.49
CXCL12-203ENST00000374429 SYCP3Q8IZU3 236 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 MB21D1Q8N884 522 aa11.98□□□□□ -0.49
CXCL12-203ENST00000374429 OR8K1Q8NGG5 319 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms