RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 OR52E8Q6IFG1 317 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 IP6K1Q92551 441 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 NLRP3Q96P20 1036 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 EYA1Q99502 592 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 TRIM4Q9C037 500 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 BABAM1Q9NWV8 329 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 BIN2Q9UBW5 565 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 NKX1-2Q9UD57 310 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 UTYO14607 1347 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 ASAP2O43150 1006 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 CYLC1P35663 651 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 MAGOHP61326 146 aaKnown RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 MRPS35P82673 323 aaKnown RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 TNNI3KQ59H18 835 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 CCDC178Q5BJE1 867 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 MAGOHBQ96A72 148 aaKnown RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 GSDMAQ96QA5 445 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 XPO6Q96QU8 1125 aaKnown RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 YIPF2Q9BWQ6 316 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 VPS54Q9P1Q0 977 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 DBF4Q9UBU7 674 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 SRPRBQ9Y5M8 271 aaKnown RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 FPGT-TNNI3KV9GXZ4 949 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 UBOX5O94941 541 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 SP100P23497 879 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 CD151P48509 253 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 IFI16Q16666 785 aaKnown RBP10.51□□□□□ -0.73
SF3A3-201ENST00000373019 GALNTL6Q49A17 601 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 ODF2Q5BJF6 829 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 ANKRD27Q96NW4 1050 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 RPS6KC1Q96S38 1066 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 DBNDD2Q9BQY9 259 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 FAM129AQ9BZQ8 928 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 ARHGEF3Q9NR81 526 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 PCDHB6Q9Y5E3 794 aa10.51□□□□□ -0.73
SF3A3-201ENST00000373019 MYH2Q9UKX2 1941 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 PLEKP08567 350 aaPredicted RBP10.5□□□□□ -0.73
SF3A3-201ENST00000373019 EIF4A1P60842 406 aaKnown RBP10.5□□□□□ -0.73
SF3A3-201ENST00000373019 HAND2P61296 217 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 CCDC38Q502W7 563 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 NOSTRINQ8IVI9 506 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 APLFQ8IW19 511 aaPredicted RBP10.5□□□□□ -0.73
SF3A3-201ENST00000373019 KIF2BQ8N4N8 673 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 ANKS4BQ8N8V4 417 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 EPSTI1Q96J88 318 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 MAST3O60307 1309 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 A0A1W2PQC6 194 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 BTBD18B2RXH4 712 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 TACC1O75410 805 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 PDHA1P08559 390 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 RXRAP19793 462 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 MSH2P43246 934 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 INHBCP55103 352 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 CTDSPL2Q05D32 466 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 PLS1Q14651 629 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 SAFBQ15424 915 aaKnown RBP eCLIP10.5□□□□□ -0.73
SF3A3-201ENST00000373019 NTRK3Q16288 839 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 AGBL2Q5U5Z8 902 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 SYCP3Q8IZU3 236 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 CENPTQ96BT3 561 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 RWDD2AQ9UIY3 292 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 IGSF1Q8N6C5 1336 aa10.5□□□□□ -0.73
SF3A3-201ENST00000373019 GRM8O00222 908 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 RANBP6O60518 1105 aaKnown RBP10.49□□□□□ -0.73
SF3A3-201ENST00000373019 ATP6V1G1O75348 118 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 OATP04181 439 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 MYBP10242 640 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 CTNNA1P35221 906 aaKnown RBP10.49□□□□□ -0.73
SF3A3-201ENST00000373019 STAT6P42226 847 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 PAFAH1B1P43034 410 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 POLE2P56282 527 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 TFCP2Q12800 502 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 ASRGL1Q7L266 308 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 TRIM42Q8IWZ5 723 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
SF3A3-201ENST00000373019 MAF1Q9H063 256 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 GGT7Q9UJ14 662 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 ZNF510Q9Y2H8 683 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 FLT4P35916 1363 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 CTNND1O60716 968 aaKnown RBP10.49□□□□□ -0.73
SF3A3-201ENST00000373019 RFC5P40937 340 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 KLK7P49862 253 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 SPAG1Q07617 926 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 SEPT2Q15019 361 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 KLHDC7AQ5VTJ3 777 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 KIFAP3Q92845 792 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 NEUROG2Q9H2A3 272 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 ECT2Q9H8V3 914 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 ZWILCHQ9H900 591 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 SWAP70Q9UH65 585 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 SHBGP04278 402 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 ATP6V1C1P21283 382 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 FLT3P36888 993 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 WASHC4Q2M389 1173 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 ACBD5Q5T8D3 534 aaPredicted RBP10.49□□□□□ -0.73
SF3A3-201ENST00000373019 TMEM154Q6P9G4 183 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 MAIP1Q8WWC4 291 aa10.49□□□□□ -0.73
SF3A3-201ENST00000373019 ATXN2LQ8WWM7 1075 aaKnown RBP10.49□□□□□ -0.73
SF3A3-201ENST00000373019 GJD4Q96KN9 370 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms