RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 NT5C3AQ9H0P0 336 aa20■□□□□ 0.79
CTSA-204ENST00000372484 SLC39A2Q9NP94 309 aa20■□□□□ 0.79
CTSA-204ENST00000372484 MAGEC2Q9UBF1 373 aaPredicted RBP20■□□□□ 0.79
CTSA-204ENST00000372484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20■□□□□ 0.791e-6■■□□□ 13.6
CTSA-204ENST00000372484 ZSCAN12O43309 604 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 TPM1P09493 284 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 SREBF1P36956 1147 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 TRAF1Q13077 416 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 DDX12PQ92771 950 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 SH2D4AQ9H788 454 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 VCPKMTQ9H867 229 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 SHTN1A0MZ66 631 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 IDEP14735 1019 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 CASP14P31944 242 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 UBXN1Q04323 297 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 TNIP1Q15025 636 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 COBLL1Q53SF7 1204 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 ANKRD40Q6AI12 368 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 CHURC1Q8WUH1 139 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 TSC1Q92574 1164 aa19.99■□□□□ 0.79
CTSA-204ENST00000372484 DUSP9Q99956 384 aaKnown RBP19.99■□□□□ 0.79
CTSA-204ENST00000372484 BRCA1P38398 1863 aaKnown RBP19.98■□□□□ 0.79
CTSA-204ENST00000372484 GYPCP04921 128 aa19.98■□□□□ 0.79
CTSA-204ENST00000372484 HYIQ5T013 277 aa19.98■□□□□ 0.79
CTSA-204ENST00000372484 CNGA4Q8IV77 575 aa19.98■□□□□ 0.79
CTSA-204ENST00000372484 KIFC2Q96AC6 838 aa19.98■□□□□ 0.79
CTSA-204ENST00000372484 PGAP2Q9UHJ9 254 aa19.98■□□□□ 0.79
CTSA-204ENST00000372484 PPP2R2CQ9Y2T4 447 aa19.98■□□□□ 0.79
CTSA-204ENST00000372484 PIK3CDO00329 1044 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 MFAP3LO75121 409 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 RBM10P98175 930 aaKnown RBP19.97■□□□□ 0.79
CTSA-204ENST00000372484 Q4G0T1 1027 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 ETNPPLQ8TBG4 499 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 SCAF8Q9UPN6 1271 aaKnown RBP19.97■□□□□ 0.79
CTSA-204ENST00000372484 KIAA1024Q9UPX6 916 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 FAM86B1E9PN63 330 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 PES1O00541 588 aaKnown RBP19.97■□□□□ 0.79
CTSA-204ENST00000372484 TUBB4AP04350 444 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 ASNSP08243 561 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 FAM86B2P0C5J1 330 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 CCDC174Q6PII3 467 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 REXO1L1PQ8IX06 675 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 EEF2KMTQ96G04 330 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 NAA15Q9BXJ9 866 aaKnown RBP19.97■□□□□ 0.79
CTSA-204ENST00000372484 MTFR1LQ9H019 292 aa19.97■□□□□ 0.79
CTSA-204ENST00000372484 TBX3O15119 743 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 STAT3P40763 770 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 FXR1P51114 621 aaKnown RBP eCLIP19.96■□□□□ 0.79
CTSA-204ENST00000372484 SYT10Q6XYQ8 523 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 TOGARAM2Q6ZUX3 1019 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 LGALS16A8MUM7 142 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 NFKBIEO00221 500 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 SSBP05455 408 aaKnown RBP eCLIP19.96■□□□□ 0.79
CTSA-204ENST00000372484 MAP3K10Q02779 954 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 TRIM14Q14142 442 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 RASA3Q14644 834 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 SAMD1Q6SPF0 538 aaPredicted RBP19.96■□□□□ 0.79
CTSA-204ENST00000372484 FAM114A1Q8IWE2 563 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 LENG9Q96B70 501 aa19.96■□□□□ 0.79
CTSA-204ENST00000372484 GLIS2Q9BZE0 524 aaPredicted RBP19.96■□□□□ 0.79
CTSA-204ENST00000372484 RANBP17Q9H2T7 1088 aaKnown RBP19.96■□□□□ 0.79
CTSA-204ENST00000372484 POTEB3A0JP26 581 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 POTECB2RU33 542 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 E9PMD0 336 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 CTIFO43310 598 aaKnown RBP19.95■□□□□ 0.78
CTSA-204ENST00000372484 SLC26A4O43511 780 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 CFBP00751 764 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 PRKCSHP14314 528 aaPredicted RBP19.95■□□□□ 0.78
CTSA-204ENST00000372484 CIITAP33076 1130 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 ZNF76P36508 570 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 HAUS3Q68CZ6 603 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 POTEBQ6S5H4 581 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 CCDC84Q86UT8 332 aaPredicted RBP19.95■□□□□ 0.78
CTSA-204ENST00000372484 CCDC51Q96ER9 411 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 TUBGCP2Q9BSJ2 902 aa19.95■□□□□ 0.78
CTSA-204ENST00000372484 BMP2KQ9NSY1 1161 aaPredicted RBP19.95■□□□□ 0.78
CTSA-204ENST00000372484 ATAD5Q96QE3 1844 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 SOWAHDA6NJG2 315 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 PSMD2Q13200 908 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 CENPPQ6IPU0 288 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 FAM160B2Q86V87 743 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 MB21D1Q8N884 522 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 FAM20AQ96MK3 541 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 SEMA6BQ9H3T3 888 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 PLA2G6O60733 806 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 EGFRP00533 1210 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 ETF1P62495 437 aaKnown RBP19.94■□□□□ 0.78
CTSA-204ENST00000372484 SPIRE1Q08AE8 756 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 TNFAIP1Q13829 316 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 TEX2Q8IWB9 1127 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 GUF1Q8N442 669 aaKnown RBP19.94■□□□□ 0.78
CTSA-204ENST00000372484 FBXO41Q8TF61 875 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 DNAJC19Q96DA6 116 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 CNOT6LQ96LI5 555 aaKnown RBP19.94■□□□□ 0.78
CTSA-204ENST00000372484 FEZ1Q99689 392 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 FEM1BQ9UK73 627 aa19.94■□□□□ 0.78
CTSA-204ENST00000372484 GOLGA6L9A6NEM1 432 aa19.93■□□□□ 0.78
CTSA-204ENST00000372484 MED24O75448 989 aa19.93■□□□□ 0.78
CTSA-204ENST00000372484 CYP3A4P08684 503 aa19.93■□□□□ 0.78
CTSA-204ENST00000372484 PLA2G4BP0C869 781 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms