RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 SLC43A3Q8NBI5 491 aa23.06■■□□□ 1.28
TMEM53-205ENST00000372244 CUL5Q93034 780 aa23.06■■□□□ 1.28
TMEM53-205ENST00000372244 UPF3BQ9BZI7 483 aaKnown RBP23.06■■□□□ 1.28
TMEM53-205ENST00000372244 RBM27Q9P2N5 1060 aaKnown RBP23.06■■□□□ 1.28
TMEM53-205ENST00000372244 BMP8BP34820 402 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 HEATR3Q7Z4Q2 680 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 TEX2Q8IWB9 1127 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 OR6J1Q8NGC5 347 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 SMARCC2Q8TAQ2 1214 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 GPKOWQ92917 476 aaPredicted RBP eCLIP23.05■■□□□ 1.28
TMEM53-205ENST00000372244 A0A0U1RQG5 324 aaPredicted RBP23.05■■□□□ 1.28
TMEM53-205ENST00000372244 ARVCFO00192 962 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 SEC24BO95487 1268 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 TGFB3P10600 412 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 CCND2P30279 289 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 MAGEA10P43363 369 aaPredicted RBP23.05■■□□□ 1.28
TMEM53-205ENST00000372244 CPT1AP50416 773 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 NTRK3Q16288 839 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 TYW1BQ6NUM6 668 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 VTI1AQ96AJ9 217 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 PDLIM7Q9NR12 457 aa23.05■■□□□ 1.28
TMEM53-205ENST00000372244 GRIN2DO15399 1336 aa23.04■■□□□ 1.28
TMEM53-205ENST00000372244 TRIM43BA6NCK2 446 aa23.04■■□□□ 1.28
TMEM53-205ENST00000372244 hCG_1984214I3L0E3 225 aa23.04■■□□□ 1.28
TMEM53-205ENST00000372244 MRPS9P82933 396 aaKnown RBP23.04■■□□□ 1.28
TMEM53-205ENST00000372244 KCNV1Q6PIU1 500 aa23.04■■□□□ 1.28
TMEM53-205ENST00000372244 ZNF713Q8N859 430 aaPredicted RBP23.04■■□□□ 1.28
TMEM53-205ENST00000372244 EMID1Q96A84 441 aaPredicted RBP23.04■■□□□ 1.28
TMEM53-205ENST00000372244 TRIM43Q96BQ3 446 aaPredicted RBP23.04■■□□□ 1.28
TMEM53-205ENST00000372244 ZNF274Q96GC6 653 aaPredicted RBP23.04■■□□□ 1.28
TMEM53-205ENST00000372244 ALDH8A1Q9H2A2 487 aaPredicted RBP23.04■■□□□ 1.28
TMEM53-205ENST00000372244 PDRG1Q9NUG6 133 aa23.04■■□□□ 1.28
TMEM53-205ENST00000372244 BARHL2Q9NY43 387 aa23.04■■□□□ 1.28
TMEM53-205ENST00000372244 STAM2O75886 525 aa23.03■■□□□ 1.28
TMEM53-205ENST00000372244 GH1P01241 217 aa23.03■■□□□ 1.28
TMEM53-205ENST00000372244 PURAQ00577 322 aaKnown RBP23.03■■□□□ 1.28
TMEM53-205ENST00000372244 ARHGAP1Q07960 439 aa23.03■■□□□ 1.28
TMEM53-205ENST00000372244 FAAP100Q0VG06 881 aa23.03■■□□□ 1.28
TMEM53-205ENST00000372244 XRRA1Q6P2D8 792 aa23.03■■□□□ 1.28
TMEM53-205ENST00000372244 SH3RF1Q7Z6J0 888 aa23.03■■□□□ 1.28
TMEM53-205ENST00000372244 SEZ6LQ9BYH1 1024 aa23.03■■□□□ 1.28
TMEM53-205ENST00000372244 POLR3EQ9NVU0 708 aa23.03■■□□□ 1.28
TMEM53-205ENST00000372244 DCDC2CA8MYV0 355 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 STXBP3O00186 592 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 PRPF3O43395 683 aaKnown RBP23.02■■□□□ 1.28
TMEM53-205ENST00000372244 KPNA6O60684 536 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 PQBP1O60828 265 aaKnown RBP23.02■■□□□ 1.28
TMEM53-205ENST00000372244 ITGA7Q13683 1181 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 PFKFB3Q16875 520 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-205ENST00000372244 BRDTQ58F21 947 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-205ENST00000372244 PCNX4Q63HM2 1172 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 PPP1R18Q6NYC8 613 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 INPP4AQ96PE3 977 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-205ENST00000372244 RIC8AQ9NPQ8 531 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 PCDH10Q9P2E7 1040 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 PRKAG2Q9UGJ0 569 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 MRVI1Q9Y6F6 885 aa23.02■■□□□ 1.28
TMEM53-205ENST00000372244 MROH7Q68CQ1 1323 aa23.02■■□□□ 1.27
TMEM53-205ENST00000372244 KIAA0355O15063 1070 aa23.01■■□□□ 1.27
TMEM53-205ENST00000372244 CLTBP09497 229 aa23.01■■□□□ 1.27
TMEM53-205ENST00000372244 IFNAR1P17181 557 aa23.01■■□□□ 1.27
TMEM53-205ENST00000372244 SP2Q02086 613 aa23.01■■□□□ 1.27
TMEM53-205ENST00000372244 PKN1Q16512 942 aa23.01■■□□□ 1.27
TMEM53-205ENST00000372244 AFG1LQ8WV93 481 aa23.01■■□□□ 1.27
TMEM53-205ENST00000372244 ZFP91Q96JP5 570 aaPredicted RBP23.01■■□□□ 1.27
TMEM53-205ENST00000372244 LAMA3Q16787 3333 aa23■■□□□ 1.27
TMEM53-205ENST00000372244 A0A1W2PPC1 479 aa23■■□□□ 1.27
TMEM53-205ENST00000372244 ICAM3P32942 547 aa23■■□□□ 1.27
TMEM53-205ENST00000372244 NAPAP54920 295 aa23■■□□□ 1.27
TMEM53-205ENST00000372244 CCT2P78371 535 aaKnown RBP23■■□□□ 1.27
TMEM53-205ENST00000372244 LAMC2Q13753 1193 aa23■■□□□ 1.27
TMEM53-205ENST00000372244 MYSM1Q5VVJ2 828 aa23■■□□□ 1.27
TMEM53-205ENST00000372244 KIAA1217Q5T5P2 1943 aa23■■□□□ 1.27
TMEM53-205ENST00000372244 SPATA31C2B4DYI2 1134 aa22.99■■□□□ 1.27
TMEM53-205ENST00000372244 CD4P01730 458 aa22.99■■□□□ 1.27
TMEM53-205ENST00000372244 SCG2P13521 617 aa22.99■■□□□ 1.27
TMEM53-205ENST00000372244 ITGB8P26012 769 aa22.99■■□□□ 1.27
TMEM53-205ENST00000372244 PSMC6P62333 389 aa22.99■■□□□ 1.27
TMEM53-205ENST00000372244 UBE2SQ16763 222 aa22.99■■□□□ 1.27
TMEM53-205ENST00000372244 FAM126BQ8IXS8 530 aa22.99■■□□□ 1.27
TMEM53-205ENST00000372244 LARP6Q9BRS8 491 aaKnown RBP22.99■■□□□ 1.27
TMEM53-205ENST00000372244 MTG1Q9BT17 334 aaPredicted RBP22.99■■□□□ 1.27
TMEM53-205ENST00000372244 NCOA5Q9HCD5 579 aaKnown RBP22.99■■□□□ 1.27
TMEM53-205ENST00000372244 SMCO2A6NFE2 343 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 MYL3P08590 195 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 MDM2Q00987 491 aaPredicted RBP22.98■■□□□ 1.27
TMEM53-205ENST00000372244 CELF3Q5SZQ8 465 aaKnown RBP22.98■■□□□ 1.27
TMEM53-205ENST00000372244 PHKBQ93100 1093 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 LBHD1Q9BQE6 289 aaPredicted RBP22.98■■□□□ 1.27
TMEM53-205ENST00000372244 RNF26Q9BY78 433 aaPredicted RBP22.98■■□□□ 1.27
TMEM53-205ENST00000372244 GLT8D2Q9H1C3 349 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 PRDM5Q9NQX1 630 aaPredicted RBP22.98■■□□□ 1.27
TMEM53-205ENST00000372244 TMEM39AQ9NV64 488 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 RTEL1Q9NZ71 1219 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 TBX21Q9UL17 535 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 PCDHA6Q9UN73 950 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 PCDHA8Q9Y5H6 950 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 SEMA3FQ13275 785 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 GNPTABQ3T906 1256 aa22.98■■□□□ 1.27
TMEM53-205ENST00000372244 C8orf34Q49A92 452 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms