RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 NAPBQ9H115 298 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 PES1O00541 588 aaKnown RBP12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 TACC1O75410 805 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 BRD2P25440 801 aaKnown RBP12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 PDE6BP35913 854 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 ABL2P42684 1182 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 RNASE9P60153 205 aaKnown RBP12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 SETQ01105 290 aaPredicted RBP12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 CSGALNACT2Q8N6G5 542 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 PANK4Q9NVE7 773 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 PALMO75781 387 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 ALADP13716 330 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 SLC35G1Q2M3R5 365 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 DNAAF5Q86Y56 855 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 HVCN1Q96D96 273 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 KRT23Q9C075 422 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 FAM207AQ9NSI2 230 aaPredicted RBP12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 LAMB1P07942 1786 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 KIAA1551Q9HCM1 1747 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 CYP2D7A0A087X1C5 515 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 RDXP35241 583 aaKnown RBP12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 RUFY1Q96T51 708 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 KDM4CQ9H3R0 1056 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 GOLPH3Q9H4A6 298 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 CNNM2Q9H8M5 875 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 EID1Q9Y6B2 187 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 NMT2O60551 498 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 UPP2O95045 317 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 KLRC1P26715 233 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 CLNS1AP54105 237 aaKnown RBP12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 IFNL2Q8IZJ0 200 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 C3orf20Q8ND61 904 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 GLIS3Q8NEA6 775 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 THOC1Q96FV9 657 aaKnown RBP12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 TXLNGYQ9BZA5 131 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 C1orf167Q5SNV9 1468 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 ORC4O43929 436 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 SMNDC1O75940 238 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 CCDC121Q6ZUS5 278 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 USP38Q8NB14 1042 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 ATXN2LQ8WWM7 1075 aaKnown RBP12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 CUL5Q93034 780 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 ISCUQ9H1K1 167 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 KIF9Q9HAQ2 790 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 PCDHGC5Q9Y5F6 944 aa12.89□□□□□ -0.35
SMARCA1-201ENST00000371121 NUP98P52948 1817 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 GRID2IPA4D2P6 1211 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 ATP2C2O75185 946 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 PDE8BO95263 885 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 ERCC3P19447 782 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 PAK2Q13177 524 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 RASGRP4Q8TDF6 673 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 P2RX5Q93086 422 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 TNS2Q63HR2 1409 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 A8MUI8 341 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 SLC8A3P57103 927 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 METTL24Q5JXM2 366 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 AGAP11Q8TF27 550 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 TLCD1Q96CP7 247 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 COL1A1P02452 1464 aaPredicted RBP12.88□□□□□ -0.35
SMARCA1-201ENST00000371121 DNA2P51530 1060 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 ZC3H6P61129 1189 aaKnown RBP12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 CFAP221Q4G0U5 840 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 ERMARDQ5T6L9 678 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 TMTC3Q6ZXV5 915 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 PARD3BQ8TEW8 1205 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 ZNF384Q8TF68 577 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 NOC4LQ9BVI4 516 aaKnown RBP12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 KLHL33A6NCF5 533 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 GHRP10912 638 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 STAT6P42226 847 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 SF3A3Q12874 501 aaKnown RBP eCLIP12.87□□□□□ -0.358e-7■■■■■ 27.4
SMARCA1-201ENST00000371121 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 MIS18BP1Q6P0N0 1132 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 PIGWQ7Z7B1 504 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 C15orf41Q9Y2V0 281 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 ANP32DO95626 131 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 PPP2R2AP63151 447 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 KCNJ2P63252 427 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 MYO1EQ12965 1108 aa12.87□□□□□ -0.35
SMARCA1-201ENST00000371121 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms