RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 EIF4E1BA6NMX2 242 aaKnown RBP17.39■□□□□ 0.37
COL18A1-203ENST00000359759 H0YIN7 160 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 POLR2BP30876 1174 aaKnown RBP17.39■□□□□ 0.37
COL18A1-203ENST00000359759 GYS2P54840 703 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 SCRN1Q12765 414 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 ECEL1O95672 775 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 MT-ND3P03897 115 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 FANCBQ8NB91 859 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 ZFYVE9O95405 1425 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 TLR3O15455 904 aaKnown RBP17.39■□□□□ 0.37
COL18A1-203ENST00000359759 SCG2P13521 617 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
COL18A1-203ENST00000359759 TESK2Q96S53 571 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 NOC2LQ9Y3T9 749 aaKnown RBP17.39■□□□□ 0.37
COL18A1-203ENST00000359759 FANCAO15360 1455 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 SRGAP2BP0DMP2 458 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 THOC5Q13769 683 aaKnown RBP17.38■□□□□ 0.37
COL18A1-203ENST00000359759 ANGPTL8Q6UXH0 198 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 ARHGEF18Q6ZSZ5 1173 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 NCAPG2Q86XI2 1143 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 RTEL1Q9NZ71 1219 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 FAM26FQ5R3K3 315 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 KCTD6Q8NC69 237 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 FBXL13Q8NEE6 735 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 POLR3CQ9BUI4 534 aaPredicted RBP17.38■□□□□ 0.37
COL18A1-203ENST00000359759 SLC38A10Q9HBR0 1119 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 ANGPTL2Q9UKU9 493 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 COL4A3BPQ9Y5P4 624 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 KLRF2D3W0D1 207 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 ANKRD65E5RJM6 399 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 PFKFB2O60825 505 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 DLGAP5Q15398 846 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 GRAMD1BQ3KR37 738 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 C11orf57Q6ZUT1 292 aaPredicted RBP17.38■□□□□ 0.37
COL18A1-203ENST00000359759 TXLNGQ9NUQ3 528 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 ADCY9O60503 1353 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 H3BRJ5 948 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 GFPT2O94808 682 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 TRIM59Q8IWR1 403 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 PNMA1Q8ND90 353 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 TNKSO95271 1327 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 FBXO11Q86XK2 927 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 IP6K1Q92551 441 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 DYDC2Q96IM9 177 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 EIF2AQ9BY44 585 aaKnown RBP17.38■□□□□ 0.37
COL18A1-203ENST00000359759 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
COL18A1-203ENST00000359759 GYG1P46976 350 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 ODR4Q5SWX8 454 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 RASGRP4Q8TDF6 673 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 TRAIPQ9BWF2 469 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 YWHAHQ04917 246 aaPredicted RBP17.37■□□□□ 0.37
COL18A1-203ENST00000359759 MAP7D3Q8IWC1 876 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 CHURC1Q8WUH1 139 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 EFHD1Q9BUP0 239 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 ZC4H2Q9NQZ6 224 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 SFMBT1Q9UHJ3 866 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 PACSIN2Q9UNF0 486 aaPredicted RBP17.37■□□□□ 0.37
COL18A1-203ENST00000359759 MCF2LO15068 1137 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 LMNB2Q03252 620 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 CCDC124Q96CT7 223 aaKnown RBP17.37■□□□□ 0.37
COL18A1-203ENST00000359759 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.372e-8■■■■□ 19.9
COL18A1-203ENST00000359759 TBC1D1Q86TI0 1168 aaPredicted RBP17.37■□□□□ 0.37
COL18A1-203ENST00000359759 TRIML2Q8N7C3 387 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 TRIML1Q8N9V2 468 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 BCAMP50895 628 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 RNASELQ05823 741 aaKnown RBP17.37■□□□□ 0.37
COL18A1-203ENST00000359759 SPTLC3Q9NUV7 552 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 TLK1Q9UKI8 766 aa17.37■□□□□ 0.37
COL18A1-203ENST00000359759 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
COL18A1-203ENST00000359759 TRIM37O94972 964 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 ESRRAP11474 423 aaPredicted RBP17.36■□□□□ 0.37
COL18A1-203ENST00000359759 XPAP23025 273 aaPredicted RBP17.36■□□□□ 0.37
COL18A1-203ENST00000359759 CDC25BP30305 580 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 HIBCHQ6NVY1 386 aaPredicted RBP17.36■□□□□ 0.37
COL18A1-203ENST00000359759 GAS2L3Q86XJ1 694 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 TEX14Q8IWB6 1497 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 TRPM2O94759 1503 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 TADA3O75528 432 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 NR2F2P24468 414 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 NT5C1BQ96P26 610 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 ATP5JP18859 108 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 KIF19Q2TAC6 998 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 C10orf76Q5T2E6 689 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 TRIM67Q6ZTA4 783 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 TRIM42Q8IWZ5 723 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 PPP1R16BQ96T49 567 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 PARD6BQ9BYG5 372 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 SLC52A2Q9HAB3 445 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 ARHGDIAP52565 204 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 MFSD14BQ5SR56 506 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 CENPKQ9BS16 269 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 SLC24A3Q9HC58 644 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 HSPD1P10809 573 aaKnown RBP17.36■□□□□ 0.37
COL18A1-203ENST00000359759 NOP14P78316 857 aaKnown RBP17.36■□□□□ 0.37
COL18A1-203ENST00000359759 DOK7Q18PE1 504 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 ATG16L1Q676U5 607 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 CALN1Q9BXU9 219 aa17.36■□□□□ 0.37
COL18A1-203ENST00000359759 ZMYM4Q5VZL5 1548 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms