RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 EEPD1Q7L9B9 569 aa28.89■■■□□ 2.21
SSBP3-202ENST00000357475 ZNF467Q7Z7K2 595 aaPredicted RBP28.89■■■□□ 2.21
SSBP3-202ENST00000357475 MORC4Q8TE76 937 aa28.89■■■□□ 2.21
SSBP3-202ENST00000357475 UIMC1Q96RL1 719 aa28.89■■■□□ 2.21
SSBP3-202ENST00000357475 IWS1Q96ST2 819 aa28.89■■■□□ 2.21
SSBP3-202ENST00000357475 NOL7Q9UMY1 257 aaKnown RBP28.89■■■□□ 2.21
SSBP3-202ENST00000357475 SLC37A4O43826 429 aa28.88■■■□□ 2.21
SSBP3-202ENST00000357475 CCNT1O60563 726 aaKnown RBP28.88■■■□□ 2.21
SSBP3-202ENST00000357475 RGS20O76081 388 aa28.88■■■□□ 2.21
SSBP3-202ENST00000357475 CCND2P30279 289 aa28.88■■■□□ 2.21
SSBP3-202ENST00000357475 RILPL1Q5EBL4 403 aa28.88■■■□□ 2.21
SSBP3-202ENST00000357475 OTOP1Q7RTM1 612 aa28.88■■■□□ 2.21
SSBP3-202ENST00000357475 TNPO1Q92973 898 aaKnown RBP28.88■■■□□ 2.21
SSBP3-202ENST00000357475 USP28Q96RU2 1077 aa28.88■■■□□ 2.21
SSBP3-202ENST00000357475 TFIP11Q9UBB9 837 aaKnown RBP28.88■■■□□ 2.21
SSBP3-202ENST00000357475 TRIM17Q9Y577 477 aa28.88■■■□□ 2.21
SSBP3-202ENST00000357475 CLIC4Q9Y696 253 aa28.88■■■□□ 2.21
SSBP3-202ENST00000357475 IGLV3-22A0A075B6J6 115 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 IGHA2P01877 340 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 CIITAP33076 1130 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 MCM7P33993 719 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 CEBPZQ03701 1054 aaKnown RBP28.87■■■□□ 2.21
SSBP3-202ENST00000357475 PDE4DQ08499 809 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 MAMDC4Q6UXC1 1216 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 TRIB2Q92519 343 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 LENG9Q96B70 501 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 TINF2Q9BSI4 451 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 SLC5A4Q9NY91 659 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 MRVI1Q9Y6F6 885 aa28.87■■■□□ 2.21
SSBP3-202ENST00000357475 SNAI1O95863 264 aaPredicted RBP28.86■■■□□ 2.21
SSBP3-202ENST00000357475 XRCC5P13010 732 aaKnown RBP28.86■■■□□ 2.21
SSBP3-202ENST00000357475 ZNF76P36508 570 aa28.86■■■□□ 2.21
SSBP3-202ENST00000357475 TRAPPC10P48553 1259 aa28.86■■■□□ 2.21
SSBP3-202ENST00000357475 WDR11Q9BZH6 1224 aa28.86■■■□□ 2.21
SSBP3-202ENST00000357475 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.86■■■□□ 2.21
SSBP3-202ENST00000357475 UBIAD1Q9Y5Z9 338 aa28.86■■■□□ 2.21
SSBP3-202ENST00000357475 ASB14A6NK59 587 aa28.85■■■□□ 2.21
SSBP3-202ENST00000357475 CYP2C19P33261 490 aa28.85■■■□□ 2.21
SSBP3-202ENST00000357475 STXBP2Q15833 593 aa28.85■■■□□ 2.21
SSBP3-202ENST00000357475 FBXO16Q8IX29 292 aaPredicted RBP28.85■■■□□ 2.21
SSBP3-202ENST00000357475 MBOAT7Q96N66 472 aa28.85■■■□□ 2.21
SSBP3-202ENST00000357475 MXRA8Q9BRK3 442 aa28.85■■■□□ 2.21
SSBP3-202ENST00000357475 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.85■■■□□ 2.21
SSBP3-202ENST00000357475 DOCK5Q9H7D0 1870 aa28.85■■■□□ 2.21
SSBP3-202ENST00000357475 CYP3A7-CYP3A51PA0A087WV96 503 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 GNRH1P01148 92 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 ELNP15502 786 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 CYP3A7P24462 503 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 HOXD10P28358 340 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 PRR16Q569H4 304 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 POTEDQ86YR6 584 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 GJA10Q969M2 543 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 KATNBL1Q9H079 304 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 TMEM60Q9H2L4 133 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 DDX25Q9UHL0 483 aaKnown RBP28.84■■■□□ 2.21
SSBP3-202ENST00000357475 TRIM32Q13049 653 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 SF3A1Q15459 793 aaKnown RBP28.84■■■□□ 2.21
SSBP3-202ENST00000357475 CEP55Q53EZ4 464 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 PRAMEF19Q5SWL8 479 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 OLFML2BQ68BL8 750 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 PPP4R3AQ6IN85 833 aa28.84■■■□□ 2.21
SSBP3-202ENST00000357475 MEIS1O00470 390 aa28.83■■■□□ 2.21
SSBP3-202ENST00000357475 EIF3JO75822 258 aaKnown RBP28.83■■■□□ 2.21
SSBP3-202ENST00000357475 ARP10275 920 aa28.83■■■□□ 2.21
SSBP3-202ENST00000357475 CTCFP49711 727 aaPredicted RBP28.83■■■□□ 2.21
SSBP3-202ENST00000357475 SEMA3FQ13275 785 aa28.83■■■□□ 2.21
SSBP3-202ENST00000357475 IRF5Q13568 498 aa28.83■■■□□ 2.21
SSBP3-202ENST00000357475 XRRA1Q6P2D8 792 aa28.83■■■□□ 2.21
SSBP3-202ENST00000357475 INPP4AQ96PE3 977 aaPredicted RBP28.83■■■□□ 2.21
SSBP3-202ENST00000357475 JADE2Q9NQC1 790 aa28.83■■■□□ 2.21
SSBP3-202ENST00000357475 PDGFCQ9NRA1 345 aa28.83■■■□□ 2.21
SSBP3-202ENST00000357475 LOC102724159A0A0B4J2E5 919 aa28.82■■■□□ 2.2
SSBP3-202ENST00000357475 PWP2Q15269 919 aaKnown RBP28.82■■■□□ 2.2
SSBP3-202ENST00000357475 ANO1Q5XXA6 986 aa28.82■■■□□ 2.2
SSBP3-202ENST00000357475 MOXD1Q6UVY6 613 aa28.82■■■□□ 2.2
SSBP3-202ENST00000357475 SEPT14Q6ZU15 432 aa28.82■■■□□ 2.2
SSBP3-202ENST00000357475 C4orf32Q8N8J7 132 aa28.82■■■□□ 2.2
SSBP3-202ENST00000357475 CNPY2Q9Y2B0 182 aa28.82■■■□□ 2.2
SSBP3-202ENST00000357475 PTCH2Q9Y6C5 1203 aa28.82■■■□□ 2.2
SSBP3-202ENST00000357475 SYNGAP1Q96PV0 1343 aa28.82■■■□□ 2.2
SSBP3-202ENST00000357475 Q4G0T1 1027 aa28.81■■■□□ 2.2
SSBP3-202ENST00000357475 TMEM63BQ5T3F8 832 aa28.81■■■□□ 2.2
SSBP3-202ENST00000357475 PLA2G4DQ86XP0 818 aa28.81■■■□□ 2.2
SSBP3-202ENST00000357475 RAET1EQ8TD07 263 aa28.81■■■□□ 2.2
SSBP3-202ENST00000357475 GCFC2P16383 781 aaKnown RBP28.8■■■□□ 2.2
SSBP3-202ENST00000357475 ARHGEF6Q15052 776 aa28.8■■■□□ 2.2
SSBP3-202ENST00000357475 PTPAQ15257 358 aa28.8■■■□□ 2.2
SSBP3-202ENST00000357475 MSL3Q8N5Y2 521 aaKnown RBP28.8■■■□□ 2.2
SSBP3-202ENST00000357475 ZNF396Q96N95 335 aaPredicted RBP28.8■■■□□ 2.2
SSBP3-202ENST00000357475 MPHOSPH6Q99547 160 aaKnown RBP28.8■■■□□ 2.2
SSBP3-202ENST00000357475 PKD2L1Q9P0L9 805 aa28.8■■■□□ 2.2
SSBP3-202ENST00000357475 B4DLN1 442 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 ADCY3O60266 1144 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 NEMFO60524 1076 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 PTGS1P23219 599 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 PTGDRQ13258 359 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 MTMR1Q13613 665 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 TAPT1Q6NXT6 567 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 KCNH7Q9NS40 1196 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 ATP6V1DQ9Y5K8 247 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms