RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 UBE2OQ9C0C9 1292 aaKnown RBP23.31■■□□□ 1.32
HCFC1R1-202ENST00000354679 POLR3EQ9NVU0 708 aa23.31■■□□□ 1.32
HCFC1R1-202ENST00000354679 KIAA1217Q5T5P2 1943 aa23.31■■□□□ 1.32
HCFC1R1-202ENST00000354679 PIK3CDO00329 1044 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 MYL3P08590 195 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 CDC27P30260 824 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 CCND2P30279 289 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 FAAP100Q0VG06 881 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 HEATR3Q7Z4Q2 680 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 GPKOWQ92917 476 aaPredicted RBP eCLIP23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 AGXT2Q9BYV1 514 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 FAM217BQ9NTX9 383 aaPredicted RBP23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 MRVI1Q9Y6F6 885 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 FRMPD4Q14CM0 1322 aa23.3■■□□□ 1.32
HCFC1R1-202ENST00000354679 LTBP2Q14767 1821 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 A6NJR5 290 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 MEIS2O14770 477 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 RGS20O76081 388 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 GH1P01241 217 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 FXR1P51114 621 aaKnown RBP eCLIP23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 ITGA7Q13683 1181 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 RUFY3Q7L099 469 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 SLC43A3Q8NBI5 491 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 PSTPIP2Q9H939 334 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 ZSWIM6Q9HCJ5 1215 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 TMEM39AQ9NV64 488 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 DDX41Q9UJV9 622 aaKnown RBP23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 LAMA3Q16787 3333 aa23.29■■□□□ 1.32
HCFC1R1-202ENST00000354679 CCDC196A0A1B0GTZ2 297 aa23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 KIAA0355O15063 1070 aa23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 PSMC6P62333 389 aa23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 PURAQ00577 322 aaKnown RBP23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 ARHGAP1Q07960 439 aa23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 WWC2Q6AWC2 1192 aa23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 SEZ6LQ9BYH1 1024 aa23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 CYP46A1Q9Y6A2 500 aa23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 V9GY48 417 aaPredicted RBP23.28■■□□□ 1.32
HCFC1R1-202ENST00000354679 NID2Q14112 1375 aa23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 ADD1P35611 737 aaKnown RBP23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 KCNV1Q6PIU1 500 aa23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 FAM126BQ8IXS8 530 aa23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 BADQ92934 168 aa23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 ZFP91Q96JP5 570 aaPredicted RBP23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 MTG1Q9BT17 334 aaPredicted RBP23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 TM6SF1Q9BZW5 370 aa23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 GRIN2DO15399 1336 aa23.27■■□□□ 1.32
HCFC1R1-202ENST00000354679 TLR3O15455 904 aaKnown RBP23.26■■□□□ 1.31
HCFC1R1-202ENST00000354679 KPNA6O60684 536 aa23.26■■□□□ 1.31
HCFC1R1-202ENST00000354679 TDHQ8IZJ6 230 aa23.26■■□□□ 1.31
HCFC1R1-202ENST00000354679 AFG1LQ8WV93 481 aa23.26■■□□□ 1.31
HCFC1R1-202ENST00000354679 TBX21Q9UL17 535 aa23.26■■□□□ 1.31
HCFC1R1-202ENST00000354679 hCG_1984214I3L0E3 225 aa23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 MMP3P08254 477 aa23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 RAG1P15918 1043 aa23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 ITGB8P26012 769 aa23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 NAPAP54920 295 aa23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 MRPS9P82933 396 aaKnown RBP23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 UBE2SQ16763 222 aa23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 PPP1R18Q6NYC8 613 aa23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 ZNF713Q8N859 430 aaPredicted RBP23.25■■□□□ 1.31
HCFC1R1-202ENST00000354679 STAM2O75886 525 aa23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 EVCP57679 992 aa23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 LAMC2Q13753 1193 aa23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 TOB2Q14106 344 aaPredicted RBP23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 GNPTABQ3T906 1256 aa23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 TYW1BQ6NUM6 668 aa23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 DHX37Q8IY37 1157 aaKnown RBP23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 EMID1Q96A84 441 aaPredicted RBP23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 UPF3BQ9BZI7 483 aaKnown RBP23.24■■□□□ 1.31
HCFC1R1-202ENST00000354679 STXBP3O00186 592 aa23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 CD4P01730 458 aa23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 TGFB3P10600 412 aa23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 UBA1P22314 1058 aaKnown RBP23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 PCNX4Q63HM2 1172 aa23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 XRRA1Q6P2D8 792 aa23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 INPP4AQ96PE3 977 aaPredicted RBP23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 BARHL2Q9NY43 387 aa23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 SCN10AQ9Y5Y9 1956 aa23.23■■□□□ 1.31
HCFC1R1-202ENST00000354679 SPDYE3A6NKU9 549 aa23.22■■□□□ 1.31
HCFC1R1-202ENST00000354679 GGPS1O95749 300 aa23.22■■□□□ 1.31
HCFC1R1-202ENST00000354679 PDIA3P30101 505 aaKnown RBP23.22■■□□□ 1.31
HCFC1R1-202ENST00000354679 SP2Q02086 613 aa23.22■■□□□ 1.31
HCFC1R1-202ENST00000354679 PPTC7Q8NI37 304 aa23.22■■□□□ 1.31
HCFC1R1-202ENST00000354679 RIC8AQ9NPQ8 531 aa23.22■■□□□ 1.31
HCFC1R1-202ENST00000354679 RTEL1Q9NZ71 1219 aa23.22■■□□□ 1.31
HCFC1R1-202ENST00000354679 SORBS3O60504 671 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 TIMP1P01033 207 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 ICAM3P32942 547 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 ADCY7P51828 1080 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 DGKDQ16760 1214 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 PFKFB3Q16875 520 aaPredicted RBP23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 NBPF20Q3BBV1 942 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 CELF3Q5SZQ8 465 aaKnown RBP23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 MYSM1Q5VVJ2 828 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 TEX2Q8IWB9 1127 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 TRPV6Q9H1D0 765 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 ALDH8A1Q9H2A2 487 aaPredicted RBP23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 PDRG1Q9NUG6 133 aa23.21■■□□□ 1.31
HCFC1R1-202ENST00000354679 PCDHA6Q9UN73 950 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms