RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 EFHBQ8N7U6 833 aa13.34□□□□□ -0.27
FN1-202ENST00000336916 FOXP4Q8IVH2 680 aaPredicted RBP13.34□□□□□ -0.27
FN1-202ENST00000336916 SUGCTQ9HAC7 445 aa13.34□□□□□ -0.27
FN1-202ENST00000336916 MED4Q9NPJ6 270 aa13.34□□□□□ -0.27
FN1-202ENST00000336916 CEP57Q86XR8 500 aa13.33□□□□□ -0.27
FN1-202ENST00000336916 PARVGQ9HBI0 331 aa13.33□□□□□ -0.27
FN1-202ENST00000336916 ATP2C2O75185 946 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 ELF1P32519 619 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 C2orf69Q8N8R5 385 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 COA7Q96BR5 231 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 DDX41Q9UJV9 622 aaKnown RBP13.33□□□□□ -0.28
FN1-202ENST00000336916 DRP2Q13474 957 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 KCNV1Q6PIU1 500 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 THEM5Q8N1Q8 247 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 RNF139Q8WU17 664 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 DRC3Q9H069 523 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 PCDHB4Q9Y5E5 795 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 DNAJC8O75937 253 aaPredicted RBP13.33□□□□□ -0.28
FN1-202ENST00000336916 CDC42EP1Q00587 391 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 TYW1BQ6NUM6 668 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 KLHL14Q9P2G3 628 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 IQGAP1P46940 1657 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 MAPK8IP1Q9UQF2 711 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 MAGI3Q5TCQ9 1506 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 ATF2P15336 505 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 ITKQ08881 620 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 LARP4BQ92615 738 aaKnown RBP13.33□□□□□ -0.28
FN1-202ENST00000336916 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 HOXC10Q9NYD6 342 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 TMEM232C9JQI7 657 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 DLATP10515 647 aaKnown RBP13.33□□□□□ -0.28
FN1-202ENST00000336916 PCK1P35558 622 aa13.33□□□□□ -0.28
FN1-202ENST00000336916 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
FN1-202ENST00000336916 PER1O15534 1290 aaPredicted RBP13.32□□□□□ -0.28
FN1-202ENST00000336916 PRDM1O75626 825 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 ADCY8P40145 1251 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 MIPOL1Q8TD10 442 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 FGAP02671 866 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 ECE1P42892 770 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 TNFAIP2Q03169 654 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 PTGDRQ13258 359 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 ADAM9Q13443 819 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 PHLDB3Q6NSJ2 640 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 DCAF4Q8WV16 495 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 RIPOR2Q9Y4F9 1068 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 RLBP1P12271 317 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 GTF2A1P52655 376 aaPredicted RBP13.32□□□□□ -0.28
FN1-202ENST00000336916 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 SPATA1Q5VX52 437 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 RNF169Q8NCN4 708 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 KMT5AQ9NQR1 393 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 USP32Q8NFA0 1604 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 TCP10L2B9ZVM9 353 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 FAM26FQ5R3K3 315 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 MICAL1Q8TDZ2 1067 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 SLC10A4Q96EP9 437 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 ABT1Q9ULW3 272 aaKnown RBP13.32□□□□□ -0.28
FN1-202ENST00000336916 FRMPD2Q68DX3 1309 aaPredicted RBP13.32□□□□□ -0.28
FN1-202ENST00000336916 BFSP1Q12934 665 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 KRT71Q3SY84 523 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 ARL6IP4Q66PJ3 421 aaKnown RBP13.32□□□□□ -0.28
FN1-202ENST00000336916 CCDC170Q8IYT3 715 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 URGCPQ8TCY9 931 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 MASTLQ96GX5 879 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 THEGQ9P2T0 379 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 STX2P32856 288 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 TMEM179Q6ZVK1 233 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 NME8Q8N427 588 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 GTF3C2Q8WUA4 911 aaPredicted RBP13.32□□□□□ -0.28
FN1-202ENST00000336916 SKA2Q8WVK7 121 aaPredicted RBP13.32□□□□□ -0.28
FN1-202ENST00000336916 PPP2R3CQ969Q6 453 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 LRRC4Q9HBW1 653 aa13.32□□□□□ -0.28
FN1-202ENST00000336916 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 INHBAP08476 426 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 LRRC63Q05C16 580 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 RBBP5Q15291 538 aaKnown RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 G2E3Q7L622 706 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 GOLGA8KD6RF30 607 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 LRRC47Q8N1G4 583 aaKnown RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 PPM1KQ8N3J5 372 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 NLRP7Q8WX94 980 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 FAM207AQ9NSI2 230 aaPredicted RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 A0A1W2PQ27 194 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 A0A1W2PQ64 194 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 A0A1W2PQD8 194 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 IQCB1Q15051 598 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 GBP7Q8N8V2 638 aaPredicted RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 ARL4AP40617 200 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 MCPH1Q8NEM0 835 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 VPS37BQ9H9H4 285 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 POLR3EQ9NVU0 708 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 BSDC1Q9NW68 430 aaPredicted RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 TAF11Q15544 211 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms