RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 VSTM4Q8IW00 320 aa13.96□□□□□ -0.18
ZNF548-201ENST00000336128 GIMAP8Q8ND71 665 aaPredicted RBP13.96□□□□□ -0.18
ZNF548-201ENST00000336128 AGBL1Q96MI9 1066 aa13.96□□□□□ -0.18
ZNF548-201ENST00000336128 WDR18Q9BV38 432 aa13.96□□□□□ -0.18
ZNF548-201ENST00000336128 EHMT1Q9H9B1 1298 aa13.96□□□□□ -0.18
ZNF548-201ENST00000336128 PICK1Q9NRD5 415 aa13.96□□□□□ -0.18
ZNF548-201ENST00000336128 EMILIN3Q9NT22 766 aa13.96□□□□□ -0.18
ZNF548-201ENST00000336128 PPP2R3BQ9Y5P8 575 aa13.96□□□□□ -0.18
ZNF548-201ENST00000336128 ZNF536O15090 1300 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 SSC5DA1L4H1 1573 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 MYMKA6NI61 221 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 VCAM1P19320 739 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 STAT3P40763 770 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 NOLC1Q14978 699 aaKnown RBP eCLIP13.95□□□□□ -0.18
ZNF548-201ENST00000336128 TPD52L1Q16890 204 aaPredicted RBP13.95□□□□□ -0.18
ZNF548-201ENST00000336128 CCDC150Q8NCX0 1101 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 ZKSCAN4Q969J2 545 aaPredicted RBP13.95□□□□□ -0.18
ZNF548-201ENST00000336128 AS3MTQ9HBK9 375 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 SPTLC3Q9NUV7 552 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 FZD1Q9UP38 647 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 MAPK8IP1Q9UQF2 711 aa13.95□□□□□ -0.18
ZNF548-201ENST00000336128 MSH4O15457 936 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 OFD1O75665 1012 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 PTPRAP18433 802 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 PDE4DQ08499 809 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 SPP2Q13103 211 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 STIM1Q13586 685 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 FAM20AQ96MK3 541 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 RPAP3Q9H6T3 665 aaPredicted RBP13.94□□□□□ -0.18
ZNF548-201ENST00000336128 FLOT1O75955 427 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 SPIRE1Q08AE8 756 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 ARMCX5Q6P1M9 558 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.94□□□□□ -0.18
ZNF548-201ENST00000336128 APTXQ7Z2E3 356 aaKnown RBP13.94□□□□□ -0.18
ZNF548-201ENST00000336128 GTPBP4Q9BZE4 634 aaKnown RBP13.94□□□□□ -0.18
ZNF548-201ENST00000336128 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 NT5C3AQ9H0P0 336 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 PPP1R9AQ9ULJ8 1098 aa13.94□□□□□ -0.18
ZNF548-201ENST00000336128 IGLV3-22A0A075B6J6 115 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 A0A1B0GTH6 734 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 DDNO94850 711 aaPredicted RBP13.93□□□□□ -0.18
ZNF548-201ENST00000336128 HSD17B4P51659 736 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 CCZ1BP86790 482 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 CCZ1P86791 482 aaPredicted RBP13.93□□□□□ -0.18
ZNF548-201ENST00000336128 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 NCAPH2Q6IBW4 605 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 CNNM4Q6P4Q7 775 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 UNC13DQ70J99 1090 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 ZNF280CQ8ND82 737 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 CYP2W1Q8TAV3 490 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 CLEC4DQ8WXI8 215 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 SLC38A10Q9HBR0 1119 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 RAVER2Q9HCJ3 691 aaKnown RBP13.93□□□□□ -0.18
ZNF548-201ENST00000336128 PVALEFA0A1B0GWK0 134 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 POTEB3A0JP26 581 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 POTECB2RU33 542 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 PSMA7O14818 248 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 MED24O75448 989 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 BACE1P56817 501 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 HAUS3Q68CZ6 603 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 POTEBQ6S5H4 581 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 DYMQ7RTS9 669 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 ERMNQ8TAM6 284 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 VAV3Q9UKW4 847 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 PITPNM2Q9BZ72 1349 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 PHIPQ8WWQ0 1821 aa13.93□□□□□ -0.18
ZNF548-201ENST00000336128 RBBP6Q7Z6E9 1792 aaKnown RBP13.92□□□□□ -0.18
ZNF548-201ENST00000336128 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 NFIBO00712 420 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 UBXN2AP68543 259 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 STK4Q13043 487 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 NR1I3Q14994 352 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 SUPT20HL1Q3ZLR7 823 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 NOL9Q5SY16 702 aaKnown RBP13.92□□□□□ -0.18
ZNF548-201ENST00000336128 CPXCR1Q8N123 301 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 KLRG1Q96E93 195 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 DHTKD1Q96HY7 919 aaPredicted RBP13.92□□□□□ -0.18
ZNF548-201ENST00000336128 KIAA1024Q9UPX6 916 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 GOLGB1Q14789 3259 aaKnown RBP13.92□□□□□ -0.18
ZNF548-201ENST00000336128 PARP14Q460N5 1801 aa13.92□□□□□ -0.18
ZNF548-201ENST00000336128 E9PMD0 336 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 FCER1AP12319 257 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 SKILP12757 684 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 ALAS1P13196 640 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 SFPQP23246 707 aaKnown RBP eCLIP13.91□□□□□ -0.18
ZNF548-201ENST00000336128 PPP1R2P41236 205 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 PMS1P54277 932 aaKnown RBP13.91□□□□□ -0.18
ZNF548-201ENST00000336128 SPAG1Q07617 926 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 MCF2L2Q86YR7 1114 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 CTAGE1Q96RT6 745 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 SYT17Q9BSW7 474 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 ADARB2Q9NS39 739 aaKnown RBP13.91□□□□□ -0.18
ZNF548-201ENST00000336128 LIMA1Q9UHB6 759 aaKnown RBP13.91□□□□□ -0.18
ZNF548-201ENST00000336128 CTDP1Q9Y5B0 961 aaPredicted RBP13.91□□□□□ -0.18
ZNF548-201ENST00000336128 STK24Q9Y6E0 443 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 ZHX2Q9Y6X8 837 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 RPTORQ8N122 1335 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 ZBED4O75132 1171 aa13.91□□□□□ -0.18
ZNF548-201ENST00000336128 SSBP05455 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms