RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 DISC1Q9NRI5 854 aa13.06□□□□□ -0.32
AMBRA1-201ENST00000314845 PIM2Q9P1W9 311 aa13.06□□□□□ -0.32
AMBRA1-201ENST00000314845 BUB1O43683 1085 aa13.06□□□□□ -0.32
AMBRA1-201ENST00000314845 AFPP02771 609 aaKnown RBP13.06□□□□□ -0.32
AMBRA1-201ENST00000314845 HLFQ16534 295 aa13.06□□□□□ -0.32
AMBRA1-201ENST00000314845 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
AMBRA1-201ENST00000314845 HOMER3Q9NSC5 361 aa13.06□□□□□ -0.32
AMBRA1-201ENST00000314845 ARHGEF37A1IGU5 675 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PFDN6O15212 129 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PTPREP23469 700 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 GBP1P32455 592 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 BFSP1Q12934 665 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 ZNF658Q5TYW1 1059 aaPredicted RBP13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 ARL6IP4Q66PJ3 421 aaKnown RBP13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 LRRC8AQ8IWT6 810 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 MCUR1Q96AQ8 359 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 TACC3Q9Y6A5 838 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PREX2Q70Z35 1606 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 CYP2D7A0A087X1C5 515 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 NOL3O60936 208 aaKnown RBP13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 CTNNA1P35221 906 aaKnown RBP13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 GKAP1Q5VSY0 366 aaPredicted RBP13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 SIRT2Q8IXJ6 389 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 GPT2Q8TD30 523 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 TSC1Q92574 1164 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 EEF2KMTQ96G04 330 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 APOL6Q9BWW8 343 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PNMA3Q9UL41 463 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 RNF40O75150 1001 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 MCAMP43121 646 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 ATP11AP98196 1134 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PSMD2Q13200 908 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PPP2R5CQ13362 524 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PI4K2BQ8TCG2 481 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 ZNF215Q9UL58 517 aaPredicted RBP13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PCDHB4Q9Y5E5 795 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 SRPRBQ9Y5M8 271 aaKnown RBP13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PARVGQ9HBI0 331 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
AMBRA1-201ENST00000314845 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 MIGA2Q7L4E1 593 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 PGBD1Q96JS3 809 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 SHROOM2Q13796 1616 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 A6NJR5 290 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 PSAPP07602 524 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 VPS41P49754 854 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 LMNB2Q03252 620 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 ALCAMQ13740 583 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 RINT1Q6NUQ1 792 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 CCNE1P24864 410 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 STX2P32856 288 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 ZNF131P52739 623 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 RSRC2Q7L4I2 434 aaKnown RBP13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 SLC10A4Q96EP9 437 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 RUNDC3BQ96NL0 473 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 C21orf2O43822 256 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 CASP14P31944 242 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 IFRD2Q12894 506 aaPredicted RBP13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 CEP85LQ5SZL2 805 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 PDXDC2PQ6P474 469 aa13.04□□□□□ -0.32
AMBRA1-201ENST00000314845 METTL23Q86XA0 190 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 MINPP1Q9UNW1 487 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 MUM1L1Q5H9M0 696 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 CACNA2D3Q8IZS8 1091 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 BBS5Q8N3I7 341 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 ANKRD13CQ8N6S4 541 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 STAG1Q8WVM7 1258 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 PASKQ96RG2 1323 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 PLEKHG2Q9H7P9 1386 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 THAP12O43422 761 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 GH2P01242 217 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 TROVE2P10155 538 aaKnown RBP eCLIP13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 SURF1Q15526 300 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 NME8Q8N427 588 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 ENOX1Q8TC92 643 aaKnown RBP13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 FAM149B1Q96BN6 582 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 EFCAB8A8MWE9 144 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 ARHGAP25P42331 645 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 GUCY2FP51841 1108 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 MAP7Q14244 749 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 LRRC41Q15345 812 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 DPCR1Q3MIW9 517 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 C10orf67Q8IYJ2 551 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 ZNF341Q9BYN7 854 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 CD209Q9NNX6 404 aa13.03□□□□□ -0.32
AMBRA1-201ENST00000314845 FBXO40Q9UH90 709 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms