RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 SIRT2Q8IXJ6 389 aa18.27■□□□□ 0.52
CNTNAP3-201ENST00000297668 NME8Q8N427 588 aa18.27■□□□□ 0.52
CNTNAP3-201ENST00000297668 SCYL1Q96KG9 808 aa18.27■□□□□ 0.52
CNTNAP3-201ENST00000297668 SEPT10Q9P0V9 454 aa18.27■□□□□ 0.52
CNTNAP3-201ENST00000297668 SRPRBQ9Y5M8 271 aaKnown RBP18.27■□□□□ 0.52
CNTNAP3-201ENST00000297668 IFT88Q13099 833 aa18.27■□□□□ 0.51
CNTNAP3-201ENST00000297668 DBN1Q16643 649 aa18.27■□□□□ 0.51
CNTNAP3-201ENST00000297668 AP1ARQ63HQ0 302 aa18.27■□□□□ 0.51
CNTNAP3-201ENST00000297668 TRIM11Q96F44 468 aa18.27■□□□□ 0.51
CNTNAP3-201ENST00000297668 FAN1Q9Y2M0 1017 aa18.27■□□□□ 0.51
CNTNAP3-201ENST00000297668 SLC5A4Q9NY91 659 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 ZSWIM5Q9P217 1185 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 PLTPP55058 493 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 PTPN12Q05209 780 aaKnown RBP18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 LCORLQ8N3X6 602 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 ATP6V0A1Q93050 837 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 SPC25Q9HBM1 224 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 JRKLQ9Y4A0 524 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 SOWAHDA6NJG2 315 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 GSTA1P08263 222 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 GSTA2P09210 222 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 SESN3P58005 492 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 PPP2R5AQ15172 486 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 TTBK2Q6IQ55 1244 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 PCDHB4Q9Y5E5 795 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 TTC36A6NLP5 189 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 MAPK4P31152 587 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 LIFRP42702 1097 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 NECTIN1Q15223 517 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 ARHGEF25Q86VW2 580 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 ZNF577Q9BSK1 485 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 WDR11Q9BZH6 1224 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 DISC1Q9NRI5 854 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 ATP8A1Q9Y2Q0 1164 aa18.26■□□□□ 0.51
CNTNAP3-201ENST00000297668 hCG_1984214I3L0E3 225 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 ZNF713Q8N859 430 aaPredicted RBP18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 SEC31BQ9NQW1 1179 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 LRRN2O75325 713 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 GARSP41250 739 aaKnown RBP18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 PIGSQ96S52 555 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 PRAMEF22A3QJZ6 481 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 PRPF3O43395 683 aaKnown RBP18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 PDE1BQ01064 536 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 FAM47CQ5HY64 1035 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 SPZ1Q9BXG8 430 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 A6NJR5 290 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 SAT1P21673 171 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 CCDC93Q567U6 631 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 PARD6BQ9BYG5 372 aa18.25■□□□□ 0.51
CNTNAP3-201ENST00000297668 OPHN1O60890 802 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 CXCR5P32302 372 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 EIF4A3P38919 411 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 SNCBQ16143 134 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 FAM160B1Q5W0V3 765 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 KCTD1Q719H9 257 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 PGBD1Q96JS3 809 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 CCDC68Q9H2F9 335 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 PCDHB6Q9Y5E3 794 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 SGK1O00141 431 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 NDUFA10O95299 355 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 FTCDO95954 541 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 SGO2Q562F6 1265 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 RPAINQ86UA6 219 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 CNKSR1Q969H4 720 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 Q9H521 79 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 SERPINB13Q9UIV8 391 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 CLIC2O15247 247 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 SART1O43290 800 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 UBXN2AP68543 259 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 ITKQ08881 620 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 ACCSQ96QU6 501 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 NACC1Q96RE7 527 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 THAP9Q9H5L6 903 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 KANSL2Q9H9L4 492 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 EVI5O60447 810 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 GCKP35557 465 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 SLC7A3Q8WY07 619 aa18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 ZBTB12Q9Y330 459 aaPredicted RBP18.24■□□□□ 0.51
CNTNAP3-201ENST00000297668 HSPA6P17066 643 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 WDR70Q9NW82 654 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 GPC4O75487 556 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 ECEL1O95672 775 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 DHX9Q08211 1270 aaKnown RBP18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 C2orf54Q08AI8 447 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 TCP11X2Q5H9J9 407 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 PANX2Q96RD6 677 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 CSRNP1Q96S65 589 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 NHEJ1Q9H9Q4 299 aaPredicted RBP18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 EMILIN3Q9NT22 766 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 SASH1O94885 1247 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 MOCS3O95396 460 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 NCAPG2Q86XI2 1143 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 RFX6Q8HWS3 928 aa18.23■□□□□ 0.51
CNTNAP3-201ENST00000297668 PBKQ96KB5 322 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms