RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 KRT79Q5XKE5 535 aa25.72■■□□□ 1.71
PTX3-201ENST00000295927 SNX29Q8TEQ0 813 aa25.72■■□□□ 1.71
PTX3-201ENST00000295927 OTUD5Q96G74 571 aa25.72■■□□□ 1.71
PTX3-201ENST00000295927 KBTBD4Q9NVX7 518 aa25.72■■□□□ 1.71
PTX3-201ENST00000295927 IGLV3-22A0A075B6J6 115 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 OAZ1P54368 228 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 PNMA5Q96PV4 448 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 NUDT12Q9BQG2 462 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 MAGEF1Q9HAY2 307 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 HOXC10Q9NYD6 342 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 MYPNQ86TC9 1320 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 IRF6O14896 467 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 TREML2Q5T2D2 321 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 SAMD3Q8N6K7 520 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 MLKLQ8NB16 471 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 FAM20AQ96MK3 541 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 MAP3K20Q9NYL2 800 aaKnown RBP25.71■■□□□ 1.71
PTX3-201ENST00000295927 ZNF214Q9UL59 606 aaPredicted RBP25.71■■□□□ 1.71
PTX3-201ENST00000295927 RIPK3Q9Y572 518 aa25.71■■□□□ 1.71
PTX3-201ENST00000295927 SPDYE5A6NIY4 337 aa25.7■■□□□ 1.7
PTX3-201ENST00000295927 SPDYE16A6NNV3 312 aaPredicted RBP25.7■■□□□ 1.7
PTX3-201ENST00000295927 MSH4O15457 936 aa25.7■■□□□ 1.7
PTX3-201ENST00000295927 TMEM132BQ14DG7 1078 aa25.7■■□□□ 1.7
PTX3-201ENST00000295927 ARMC9Q7Z3E5 817 aa25.7■■□□□ 1.7
PTX3-201ENST00000295927 SNRNP48Q6IEG0 339 aaKnown RBP25.69■■□□□ 1.7
PTX3-201ENST00000295927 SYTL5Q8TDW5 730 aaPredicted RBP25.69■■□□□ 1.7
PTX3-201ENST00000295927 CDK5RAP3Q96JB5 506 aa25.69■■□□□ 1.7
PTX3-201ENST00000295927 RNF146Q9NTX7 359 aa25.69■■□□□ 1.7
PTX3-201ENST00000295927 RPTORQ8N122 1335 aa25.69■■□□□ 1.7
PTX3-201ENST00000295927 A0A0G2JLL6 359 aaPredicted RBP25.68■■□□□ 1.7
PTX3-201ENST00000295927 SMTNL1A8MU46 457 aa25.68■■□□□ 1.7
PTX3-201ENST00000295927 CXCL11O14625 94 aa25.68■■□□□ 1.7
PTX3-201ENST00000295927 ATP2A1O14983 1001 aa25.68■■□□□ 1.7
PTX3-201ENST00000295927 RPS6P62753 249 aaKnown RBP25.68■■□□□ 1.7
PTX3-201ENST00000295927 NCAPHQ15003 741 aa25.68■■□□□ 1.7
PTX3-201ENST00000295927 MAP1SQ66K74 1059 aaPredicted RBP25.68■■□□□ 1.7
PTX3-201ENST00000295927 GADL1Q6ZQY3 521 aa25.68■■□□□ 1.7
PTX3-201ENST00000295927 PRRT2Q7Z6L0 340 aaPredicted RBP25.68■■□□□ 1.7
PTX3-201ENST00000295927 DACH1Q9UI36 760 aa25.68■■□□□ 1.7
PTX3-201ENST00000295927 IKBKBO14920 756 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 MYL1P05976 194 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 STAT3P40763 770 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 SPIRE1Q08AE8 756 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 TMEM119Q4V9L6 283 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 CEP55Q53EZ4 464 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 PLA2G4DQ86XP0 818 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 PROCA1Q8NCQ7 364 aaPredicted RBP25.67■■□□□ 1.7
PTX3-201ENST00000295927 BLOC1S4Q9NUP1 217 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 STK17AQ9UEE5 414 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 RABGAP1Q9Y3P9 1069 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 RPN1P04843 607 aaKnown RBP25.67■■□□□ 1.7
PTX3-201ENST00000295927 PPIL2Q13356 520 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 SLC30A10Q6XR72 485 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 RNF207Q6ZRF8 634 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 ZFP91Q96JP5 570 aaPredicted RBP25.67■■□□□ 1.7
PTX3-201ENST00000295927 TEX13BQ9BXU2 312 aa25.67■■□□□ 1.7
PTX3-201ENST00000295927 TRAF5O00463 557 aa25.66■■□□□ 1.7
PTX3-201ENST00000295927 ECM1Q16610 540 aa25.66■■□□□ 1.7
PTX3-201ENST00000295927 NSMFQ6X4W1 530 aa25.66■■□□□ 1.7
PTX3-201ENST00000295927 KCNH4Q9UQ05 1017 aa25.66■■□□□ 1.7
PTX3-201ENST00000295927 CCT6AP40227 531 aaKnown RBP25.65■■□□□ 1.7
PTX3-201ENST00000295927 MYL5Q02045 173 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 HYIQ5T013 277 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 LDLRAD1Q5T700 205 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 OPTNQ96CV9 577 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 TAAR1Q96RJ0 339 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 RMND1Q9NWS8 449 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 FRMPD4Q14CM0 1322 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 KDM3AQ9Y4C1 1321 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 MEIS1O00470 390 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 HOXA7P31268 230 aaPredicted RBP25.65■■□□□ 1.7
PTX3-201ENST00000295927 FMR1Q06787 632 aaKnown RBP eCLIP25.65■■□□□ 1.7
PTX3-201ENST00000295927 SARM1Q6SZW1 724 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 IL31RAQ8NI17 732 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 TRIM44Q96DX7 344 aaPredicted RBP25.65■■□□□ 1.7
PTX3-201ENST00000295927 RRAGCQ9HB90 399 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 VAV3Q9UKW4 847 aa25.65■■□□□ 1.7
PTX3-201ENST00000295927 A0A0G2JMZ2 1700 aa25.64■■□□□ 1.7
PTX3-201ENST00000295927 NCAPH2Q6IBW4 605 aa25.64■■□□□ 1.69
PTX3-201ENST00000295927 SV2BQ7L1I2 683 aa25.64■■□□□ 1.69
PTX3-201ENST00000295927 KCNK18Q7Z418 384 aa25.64■■□□□ 1.69
PTX3-201ENST00000295927 LARP4BQ92615 738 aaKnown RBP25.64■■□□□ 1.69
PTX3-201ENST00000295927 C7orf25Q9BPX7 421 aa25.64■■□□□ 1.69
PTX3-201ENST00000295927 MXRA8Q9BRK3 442 aa25.64■■□□□ 1.69
PTX3-201ENST00000295927 TRIM5Q9C035 493 aa25.64■■□□□ 1.69
PTX3-201ENST00000295927 SLC26A4O43511 780 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 AMPD3Q01432 767 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 BAATQ14032 418 aaPredicted RBP25.63■■□□□ 1.69
PTX3-201ENST00000295927 DHX8Q14562 1220 aaKnown RBP25.63■■□□□ 1.69
PTX3-201ENST00000295927 MCM6Q14566 821 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 PLS1Q14651 629 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 TKFCQ3LXA3 575 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 RAD54LQ92698 747 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 SLC5A5Q92911 643 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 TRIM9Q9C026 710 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 ZNF408Q9H9D4 720 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 KLRC4O43908 158 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 TPM4P67936 248 aa25.63■■□□□ 1.69
PTX3-201ENST00000295927 SETQ01105 290 aaPredicted RBP25.63■■□□□ 1.69
PTX3-201ENST00000295927 PCNX4Q63HM2 1172 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms