RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 HOMER1Q86YM7 354 aa20.14■□□□□ 0.81
TFF3-201ENST00000291525 LAMC2Q13753 1193 aa20.13■□□□□ 0.81
TFF3-201ENST00000291525 CHST3Q7LGC8 479 aa20.13■□□□□ 0.81
TFF3-201ENST00000291525 CATIPQ7Z7H3 387 aa20.13■□□□□ 0.81
TFF3-201ENST00000291525 EMID1Q96A84 441 aaPredicted RBP20.13■□□□□ 0.81
TFF3-201ENST00000291525 KATNAL1Q9BW62 490 aa20.13■□□□□ 0.81
TFF3-201ENST00000291525 SLC28A3Q9HAS3 691 aa20.13■□□□□ 0.81
TFF3-201ENST00000291525 SCN5AQ14524 2016 aa20.12■□□□□ 0.81
TFF3-201ENST00000291525 MYH7BA7E2Y1 1941 aa20.12■□□□□ 0.81
TFF3-201ENST00000291525 TMEM67Q5HYA8 995 aa20.12■□□□□ 0.81
TFF3-201ENST00000291525 DEFB128Q7Z7B8 93 aa20.12■□□□□ 0.81
TFF3-201ENST00000291525 SESTD1Q86VW0 696 aa20.12■□□□□ 0.81
TFF3-201ENST00000291525 CAGE1Q8TC20 777 aa20.12■□□□□ 0.81
TFF3-201ENST00000291525 PDCD2LQ9BRP1 358 aa20.12■□□□□ 0.81
TFF3-201ENST00000291525 RIOX1Q9H6W3 641 aa20.12■□□□□ 0.81
TFF3-201ENST00000291525 DDX41Q9UJV9 622 aaKnown RBP20.12■□□□□ 0.81
TFF3-201ENST00000291525 MYO9BQ13459 2157 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 GCOM1H8Y6P7 765 aaPredicted RBP20.11■□□□□ 0.81
TFF3-201ENST00000291525 OPLAHO14841 1288 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 PPP1R11O60927 126 aaPredicted RBP20.11■□□□□ 0.81
TFF3-201ENST00000291525 POLR2MP0CAP2 368 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 MYCLP12524 364 aaPredicted RBP20.11■□□□□ 0.81
TFF3-201ENST00000291525 PTGISQ16647 500 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 STOX1Q6ZVD7 989 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 DHX37Q8IY37 1157 aaKnown RBP20.11■□□□□ 0.81
TFF3-201ENST00000291525 PPTC7Q8NI37 304 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 MAP4K1Q92918 833 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 PIGSQ96S52 555 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 NKX2-4Q9H2Z4 354 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 PCDHA11Q9Y5I1 949 aa20.11■□□□□ 0.81
TFF3-201ENST00000291525 BAZ2BQ9UIF8 2168 aaKnown RBP20.11■□□□□ 0.81
TFF3-201ENST00000291525 PNMA6FA0A0J9YX94 578 aa20.1■□□□□ 0.81
TFF3-201ENST00000291525 ATP2A2P16615 1042 aaKnown RBP20.1■□□□□ 0.81
TFF3-201ENST00000291525 CCND2P30279 289 aa20.1■□□□□ 0.81
TFF3-201ENST00000291525 TROAPQ12815 778 aa20.1■□□□□ 0.81
TFF3-201ENST00000291525 CASC1Q6TDU7 716 aa20.1■□□□□ 0.81
TFF3-201ENST00000291525 COL25A1Q9BXS0 654 aaPredicted RBP20.1■□□□□ 0.81
TFF3-201ENST00000291525 FTOQ9C0B1 505 aaKnown RBP eCLIP20.1■□□□□ 0.81
TFF3-201ENST00000291525 PRDM12Q9H4Q4 367 aa20.1■□□□□ 0.81
TFF3-201ENST00000291525 RBM8AQ9Y5S9 174 aaKnown RBP20.1■□□□□ 0.81
TFF3-201ENST00000291525 TRIP12Q14669 1992 aaPredicted RBP20.09■□□□□ 0.81
TFF3-201ENST00000291525 PARNO95453 639 aaKnown RBP20.09■□□□□ 0.81
TFF3-201ENST00000291525 IQCF3P0C7M6 154 aa20.09■□□□□ 0.81
TFF3-201ENST00000291525 HOXA13P31271 388 aaPredicted RBP20.09■□□□□ 0.81
TFF3-201ENST00000291525 PGM5Q15124 567 aa20.09■□□□□ 0.81
TFF3-201ENST00000291525 MB21D2Q8IYB1 491 aaPredicted RBP20.09■□□□□ 0.81
TFF3-201ENST00000291525 C7orf31Q8N865 590 aa20.09■□□□□ 0.81
TFF3-201ENST00000291525 CTCFLQ8NI51 663 aaPredicted RBP20.09■□□□□ 0.81
TFF3-201ENST00000291525 AFAP1L1Q8TED9 768 aa20.09■□□□□ 0.81
TFF3-201ENST00000291525 PPP1R13LQ8WUF5 828 aa20.09■□□□□ 0.81
TFF3-201ENST00000291525 SLC9A7Q96T83 725 aa20.09■□□□□ 0.81
TFF3-201ENST00000291525 MAP3K14Q99558 947 aa20.09■□□□□ 0.81
TFF3-201ENST00000291525 MTA3Q9BTC8 594 aa20.09■□□□□ 0.81
TFF3-201ENST00000291525 A0A0C4DFX4 3053 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 CDH23Q9H251 3354 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 CUL9Q8IWT3 2517 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 UNC80Q8N2C7 3258 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 TGFB3P10600 412 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 KIF5BP33176 963 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 PSEN2P49810 448 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 PPP2R2DQ66LE6 453 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 VSIG10LQ86VR7 867 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 KAT2BQ92831 832 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 GTF2IRD1Q9UHL9 959 aa20.08■□□□□ 0.81
TFF3-201ENST00000291525 YBX2Q9Y2T7 364 aaKnown RBP20.08■□□□□ 0.81
TFF3-201ENST00000291525 DDAH1O94760 285 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 F2P00734 622 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 RABGGTBP53611 331 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 MFSD10Q14728 455 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 GNPTABQ3T906 1256 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 GDF6Q6KF10 455 aaPredicted RBP20.07■□□□□ 0.8
TFF3-201ENST00000291525 FCHSD1Q86WN1 690 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 PHOSPHO2Q8TCD6 241 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 SYMPKQ92797 1274 aaKnown RBP20.07■□□□□ 0.8
TFF3-201ENST00000291525 VWCEQ96DN2 955 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 SENP2Q9HC62 589 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 TAF6LQ9Y6J9 622 aa20.07■□□□□ 0.8
TFF3-201ENST00000291525 CYTH3O43739 400 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 PPFIA4O75335 1185 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 STAM2O75886 525 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 BAIAP3O94812 1187 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 GGPS1O95749 300 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 GNAQP50148 359 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 ANTXR2P58335 489 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 SLC35G1Q2M3R5 365 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 CELF3Q5SZQ8 465 aaKnown RBP20.06■□□□□ 0.8
TFF3-201ENST00000291525 MYSM1Q5VVJ2 828 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 ZNF654Q8IZM8 581 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 TMTC2Q8N394 836 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 IGDCC4Q8TDY8 1250 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 CUL5Q93034 780 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 RRP36Q96EU6 259 aaKnown RBP20.06■□□□□ 0.8
TFF3-201ENST00000291525 SPATA33Q96N06 139 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 LZTS2Q9BRK4 669 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 ALG1Q9BT22 464 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 SPZ1Q9BXG8 430 aa20.06■□□□□ 0.8
TFF3-201ENST00000291525 SEC63Q9UGP8 760 aaKnown RBP20.06■□□□□ 0.8
TFF3-201ENST00000291525 RGS20O76081 388 aa20.05■□□□□ 0.8
TFF3-201ENST00000291525 ZNF286BP0CG31 522 aa20.05■□□□□ 0.8
TFF3-201ENST00000291525 HOXD8P13378 290 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms