RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 STK4Q13043 487 aa16.53■□□□□ 0.24
XRCC1-201ENST00000262887 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
XRCC1-201ENST00000262887 ADGRA1Q86SQ6 560 aa16.53■□□□□ 0.24
XRCC1-201ENST00000262887 FAM228AQ86W67 206 aa16.53■□□□□ 0.24
XRCC1-201ENST00000262887 BLIDQ8IZY5 108 aa16.53■□□□□ 0.24
XRCC1-201ENST00000262887 OSBPL7Q9BZF2 842 aa16.53■□□□□ 0.24
XRCC1-201ENST00000262887 HAUS2Q9NVX0 235 aa16.53■□□□□ 0.24
XRCC1-201ENST00000262887 STRCP1A6NGW2 1772 aa16.53■□□□□ 0.24
XRCC1-201ENST00000262887 CALML3P27482 149 aa16.52■□□□□ 0.24
XRCC1-201ENST00000262887 GFPT1Q06210 699 aaPredicted RBP16.52■□□□□ 0.24
XRCC1-201ENST00000262887 CRYMQ14894 314 aa16.52■□□□□ 0.24
XRCC1-201ENST00000262887 ANKRD20A8PQ5CZ79 823 aa16.52■□□□□ 0.24
XRCC1-201ENST00000262887 FAM43BQ6ZT52 329 aaPredicted RBP16.52■□□□□ 0.24
XRCC1-201ENST00000262887 TEX11Q8IYF3 940 aa16.52■□□□□ 0.24
XRCC1-201ENST00000262887 KRT12Q99456 494 aa16.52■□□□□ 0.24
XRCC1-201ENST00000262887 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.52■□□□□ 0.24
XRCC1-201ENST00000262887 FAM205AQ6ZU69 1335 aa16.52■□□□□ 0.24
XRCC1-201ENST00000262887 TNS2Q63HR2 1409 aa16.52■□□□□ 0.24
XRCC1-201ENST00000262887 MAGEB6P1A0A0J9YX57 407 aa16.52■□□□□ 0.23
XRCC1-201ENST00000262887 HSPA9P38646 679 aaKnown RBP16.52■□□□□ 0.23
XRCC1-201ENST00000262887 DNAJC10Q8IXB1 793 aa16.52■□□□□ 0.23
XRCC1-201ENST00000262887 RNF10Q8N5U6 811 aaKnown RBP16.52■□□□□ 0.23
XRCC1-201ENST00000262887 RASGRP4Q8TDF6 673 aa16.52■□□□□ 0.23
XRCC1-201ENST00000262887 TPX2Q9ULW0 747 aaKnown RBP16.52■□□□□ 0.23
XRCC1-201ENST00000262887 SIK3Q9Y2K2 1263 aa16.52■□□□□ 0.23
XRCC1-201ENST00000262887 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 C1orf167Q5SNV9 1468 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 GCOM1H8Y6P7 765 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-201ENST00000262887 ZPR1O75312 459 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 MYZAPP0CAP1 466 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 FCER1AP12319 257 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 ASIC1P78348 528 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 LRIG3Q6UXM1 1119 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 CCSER1Q9C0I3 900 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 TMEM60Q9H2L4 133 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 NDST4Q9H3R1 872 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 TRAPPC3O43617 180 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 SLC1A4P43007 532 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 SARNPP82979 210 aaKnown RBP16.51■□□□□ 0.23
XRCC1-201ENST00000262887 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-201ENST00000262887 SPRED3Q2MJR0 410 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 LRRC15Q8TF66 581 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 TRIM9Q9C026 710 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 PLCB1Q9NQ66 1216 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 PAPPAQ13219 1627 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 ZNF142P52746 1687 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-201ENST00000262887 PLCH1Q4KWH8 1693 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 SLC8A1P32418 973 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 PPP1R2P41236 205 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 CLNS1AP54105 237 aaKnown RBP16.51■□□□□ 0.23
XRCC1-201ENST00000262887 IFFO1Q0D2I5 559 aa16.51■□□□□ 0.23
XRCC1-201ENST00000262887 TDRD12Q587J7 1177 aaKnown RBP16.51■□□□□ 0.23
XRCC1-201ENST00000262887 NAIF1Q69YI7 327 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-201ENST00000262887 ARAP2Q8WZ64 1704 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 A0A1B0GUA9 196 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 GRID2IPA4D2P6 1211 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 PLCG1P19174 1290 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 PAX7P23759 505 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 E2F5Q15329 346 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 TRADDQ15628 312 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 CCDC84Q86UT8 332 aaPredicted RBP16.5■□□□□ 0.23
XRCC1-201ENST00000262887 SEC16BQ96JE7 1060 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 KLHL33A6NCF5 533 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 SCTRP47872 440 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 IRX1P78414 480 aaPredicted RBP16.5■□□□□ 0.23
XRCC1-201ENST00000262887 PPARDQ03181 441 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 QPCTQ16769 361 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 CACNA2D4Q7Z3S7 1137 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 FMNL3Q8IVF7 1028 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 GPKOWQ92917 476 aaPredicted RBP eCLIP16.5■□□□□ 0.23
XRCC1-201ENST00000262887 ATP6V0A4Q9HBG4 840 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 SLC12A6Q9UHW9 1150 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
XRCC1-201ENST00000262887 LEMD3Q9Y2U8 911 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 MYH3P11055 1940 aa16.5■□□□□ 0.23
XRCC1-201ENST00000262887 NMT2O60551 498 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 HLTFQ14527 1009 aaKnown RBP eCLIP16.49■□□□□ 0.23
XRCC1-201ENST00000262887 CACNA2D3Q8IZS8 1091 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.49■□□□□ 0.23
XRCC1-201ENST00000262887 CUEDC2Q9H467 287 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 MAGEF1Q9HAY2 307 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 PCDHA4Q9UN74 947 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 EP400Q96L91 3159 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 SRCAPQ6ZRS2 3230 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 PALMO75781 387 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 FTCDO95954 541 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 RNASE9P60153 205 aaKnown RBP16.49■□□□□ 0.23
XRCC1-201ENST00000262887 LACTB2Q53H82 288 aaPredicted RBP16.49■□□□□ 0.23
XRCC1-201ENST00000262887 TAF1DQ9H5J8 278 aaPredicted RBP16.49■□□□□ 0.23
XRCC1-201ENST00000262887 SLC24A3Q9HC58 644 aa16.49■□□□□ 0.23
XRCC1-201ENST00000262887 STARD3NLO95772 234 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 HSD17B3P37058 310 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 XRCC4Q13426 336 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 ASTE1Q2TB18 679 aaPredicted RBP16.48■□□□□ 0.23
XRCC1-201ENST00000262887 CNNM4Q6P4Q7 775 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 TLDC1Q6P9B6 456 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms