RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 KIAA1468Q9P260 1216 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 PASKQ96RG2 1323 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 MAPK4P31152 587 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 PPP4R4Q6NUP7 873 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 SLC10A4Q96EP9 437 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 MED7O43513 233 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 SERPINB6P35237 376 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 CCDC17Q96LX7 622 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
COL1A1-201ENST00000225964 CLIC2O15247 247 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 RASSF7Q02833 373 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 WHAMMP3Q1A5X7 153 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 KRT27Q7Z3Y8 459 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL1A1-201ENST00000225964 MOSPD1Q9UJG1 213 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 USH1CQ9Y6N9 552 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 OPHN1O60890 802 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 TTC4O95801 387 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 CPP00450 1065 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 EPHB1P54762 984 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 ASPHQ12797 758 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 DNAAF3Q8N9W5 541 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 RASGRP4Q8TDF6 673 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 LRRC4Q9HBW1 653 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 A0A1B0GUA9 196 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 SOX5P35711 763 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 SNAP25P60880 206 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 KCTD6Q8NC69 237 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 GSTA4O15217 222 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 PFKFB2O60825 505 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 KCNQ4P56696 695 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 DSTYKQ6XUX3 929 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 SCARA5Q6ZMJ2 495 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 LRRC8CQ8TDW0 803 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 ASAP1Q9ULH1 1129 aa14.39□□□□□ -0.11
COL1A1-201ENST00000225964 GOLGA8KD6RF30 607 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 GPC4O75487 556 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 MYO1EQ12965 1108 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 GPATCH4Q5T3I0 446 aaKnown RBP14.38□□□□□ -0.11
COL1A1-201ENST00000225964 C1orf228Q6PIY5 440 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 BAIAP2L1Q9UHR4 511 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 BTBD18B2RXH4 712 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
COL1A1-201ENST00000225964 KRT1P04264 644 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 GAP43P17677 238 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL1A1-201ENST00000225964 SIX6OS1Q8N1H7 587 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 CDC26Q8NHZ8 85 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
COL1A1-201ENST00000225964 IFT122Q9HBG6 1241 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 SESN3P58005 492 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 PPP2R5EQ16537 467 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 CFAP36Q96G28 342 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 SLITRK6Q9H5Y7 841 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 HOMER3Q9NSC5 361 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 BMP3P12645 472 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 STMN1P16949 149 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 PUS3Q9BZE2 481 aaKnown RBP14.38□□□□□ -0.11
COL1A1-201ENST00000225964 WDR64B1ANS9 1081 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 GNGT2O14610 69 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 PSAPP07602 524 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 H2AFZP0C0S5 128 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 SRGAP2CP0DJJ0 459 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 ARL4AP40617 200 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 ATP1A2P50993 1020 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 H2AFVQ71UI9 128 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 SPATA17Q96L03 361 aa14.38□□□□□ -0.11
COL1A1-201ENST00000225964 CPSF2Q9P2I0 782 aaKnown RBP14.38□□□□□ -0.11
COL1A1-201ENST00000225964 BLMP54132 1417 aaPredicted RBP14.38□□□□□ -0.11
COL1A1-201ENST00000225964 STX1BP61266 288 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 DARS2Q6PI48 645 aaKnown RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 ARHGEF18Q6ZSZ5 1173 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 TPCN1Q9ULQ1 816 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 MYO1FO00160 1098 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 AFPP02771 609 aaKnown RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 GNGT1P63211 74 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 TRIM68Q6AZZ1 485 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 LARP4BQ92615 738 aaKnown RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 HEXIM2Q96MH2 286 aaKnown RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 RUNDC3BQ96NL0 473 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 MCF2LO15068 1137 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 LRRC41Q15345 812 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 CC2D2BQ6DHV5 1058 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 OR6B2Q6IFH4 312 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 USP28Q96RU2 1077 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 PPP1R12AO14974 1030 aaPredicted RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 LRRN2O75325 713 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 PCP11498 1178 aaKnown RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 NR2F2P24468 414 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 HINFPQ9BQA5 517 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 MRPL46Q9H2W6 279 aaKnown RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 ARHGEF37A1IGU5 675 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 CD58P19256 250 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 FOXD4Q12950 439 aaPredicted RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 ELMOD1Q8N336 334 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 RPF1Q9H9Y2 349 aaKnown RBP14.37□□□□□ -0.11
COL1A1-201ENST00000225964 MAPKBP1O60336 1514 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 NDUFA8P51970 172 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 TRIM11Q96F44 468 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms