RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 RIC8AQ9NPQ8 531 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 PCDHB6Q9Y5E3 794 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 SRPRBQ9Y5M8 271 aaKnown RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 SNAP23O00161 211 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 RGS16O15492 202 aaPredicted RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 TBC1D8O95759 1140 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 CHGBP05060 677 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 POLGP54098 1239 aaPredicted RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 UBXN2AP68543 259 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 STMN2Q93045 179 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 PLA2G12BQ9BX93 195 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 VPS37BQ9H9H4 285 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 PPANQ9NQ55 473 aaKnown RBP12.6□□□□□ -0.39
NOD1-201ENST00000222823 STK17AQ9UEE5 414 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 CDC23Q9UJX2 597 aa12.6□□□□□ -0.39
NOD1-201ENST00000222823 HNRNPDLO14979 420 aaKnown RBP12.59□□□□□ -0.39
NOD1-201ENST00000222823 GDF11O95390 407 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 PDE6CP51160 858 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 EHHADHQ08426 723 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 LRRC41Q15345 812 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 DGKHQ86XP1 1220 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 RETREG2Q8NC44 543 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 WDR11Q9BZH6 1224 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 NRBP2Q9NSY0 501 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 SLC5A4Q9NY91 659 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 hCG_1984214I3L0E3 225 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 MYL1P05976 194 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 CEP85LQ5SZL2 805 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 ZNF713Q8N859 430 aaPredicted RBP12.59□□□□□ -0.39
NOD1-201ENST00000222823 PLCB1Q9NQ66 1216 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 PI4KBQ9UBF8 816 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 MAN1B1Q9UKM7 699 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 BZW2Q9Y6E2 419 aaKnown RBP12.59□□□□□ -0.39
NOD1-201ENST00000222823 TNNC2P02585 160 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 ZNF658Q5TYW1 1059 aaPredicted RBP12.59□□□□□ -0.39
NOD1-201ENST00000222823 NCAPG2Q86XI2 1143 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 CTAGE3PQ8IX95 158 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 TBC1D31Q96DN5 1066 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 ZNF577Q9BSK1 485 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 NACA2Q9H009 215 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 SPC25Q9HBM1 224 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 TTLL3Q9Y4R7 772 aa12.59□□□□□ -0.39
NOD1-201ENST00000222823 CCDC160A6NGH7 325 aa12.58□□□□□ -0.39
NOD1-201ENST00000222823 GRAPQ13588 217 aa12.58□□□□□ -0.39
NOD1-201ENST00000222823 MAN2A1Q16706 1144 aa12.58□□□□□ -0.39
NOD1-201ENST00000222823 ADAT2Q7Z6V5 191 aaKnown RBP12.58□□□□□ -0.39
NOD1-201ENST00000222823 SLC35F6Q8N357 371 aa12.58□□□□□ -0.39
NOD1-201ENST00000222823 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.39
NOD1-201ENST00000222823 ATP6V0A1Q93050 837 aa12.58□□□□□ -0.39
NOD1-201ENST00000222823 BPIFA3Q9BQP9 254 aa12.58□□□□□ -0.39
NOD1-201ENST00000222823 FER1L4A9Z1Z3 1794 aa12.58□□□□□ -0.39
NOD1-201ENST00000222823 CACNA1FO60840 1977 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 RASSF7Q02833 373 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 HADHQ16836 314 aaKnown RBP12.58□□□□□ -0.4
NOD1-201ENST00000222823 GADL1Q6ZQY3 521 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 DPH5Q9H2P9 285 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 PEAK1Q9H792 1746 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
NOD1-201ENST00000222823 SF3A3Q12874 501 aaKnown RBP eCLIP12.58□□□□□ -0.4
NOD1-201ENST00000222823 PTPN21Q16825 1174 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 BSPRYQ5W0U4 402 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 TBC1D10CQ8IV04 446 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 EPSTI1Q96J88 318 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 FUCA2Q9BTY2 467 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 SAMSN1Q9NSI8 373 aaKnown RBP12.58□□□□□ -0.4
NOD1-201ENST00000222823 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 HESX1Q9UBX0 185 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 PTK2Q05397 1052 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 GOLGA8FQ08AF8 430 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 GOLGA8DPQ0D2H9 430 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 NEDD9Q14511 834 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 ALX1Q15699 326 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 ARHGAP27Q6ZUM4 889 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 VPS52Q8N1B4 723 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 RSAD2Q8WXG1 361 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 CCT6BQ92526 530 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 RABGGTAQ92696 567 aa12.58□□□□□ -0.4
NOD1-201ENST00000222823 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 CCNE1P24864 410 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 TMOD1P28289 359 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 ADCY8P40145 1251 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 SCARF1Q14162 830 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 SCYL2Q6P3W7 929 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 PPP1R13BQ96KQ4 1090 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 RIOK1Q9BRS2 568 aaKnown RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 GJB4Q9NTQ9 266 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 STK36Q9NRP7 1315 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 GIPC1O14908 333 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms