RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 PPP2R3AQ06190 1150 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 SURF1Q15526 300 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 AOC3Q16853 763 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 INF2Q27J81 1249 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 LRCH2Q5VUJ6 765 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 SND1Q7KZF4 910 aaKnown RBP eCLIP4.68□□□□□ -1.66
CFTR-201ENST00000003084 DYMQ7RTS9 669 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 BPHLQ86WA6 291 aaPredicted RBP4.68□□□□□ -1.66
CFTR-201ENST00000003084 GPR161Q8N6U8 529 aaKnown RBP4.68□□□□□ -1.66
CFTR-201ENST00000003084 MED10Q9BTT4 135 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 GOLGA6AQ9NYA3 693 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 RNF181Q9P0P0 153 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 LRFN2Q9ULH4 789 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 FAM181BA6NEQ2 426 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 GDF11O95390 407 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 GNAT1P11488 350 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 FSHRP23945 695 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 CMA1P23946 247 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 TECP42680 631 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 VAV2P52735 878 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 RASGRF1Q13972 1273 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 PPP1R7Q15435 360 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 SPECC1LQ69YQ0 1117 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 RCSD1Q6JBY9 416 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 CCDC186Q7Z3E2 898 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 DGKHQ86XP1 1220 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 C16orf45Q96MC5 204 aaPredicted RBP4.68□□□□□ -1.66
CFTR-201ENST00000003084 NACA2Q9H009 215 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 CD209Q9NNX6 404 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 FAM169AQ9Y6X4 670 aa4.68□□□□□ -1.66
CFTR-201ENST00000003084 LRRC7Q96NW7 1537 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TLR3O15455 904 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 GOLGA8HP0CJ92 632 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TNNI1P19237 187 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 WDR4P57081 412 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 MAEAQ7L5Y9 396 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 FASTKD5Q7L8L6 764 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 METTL23Q86XA0 190 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TMTC1Q8IUR5 882 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 CACTINQ8WUQ7 758 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 EDC3Q96F86 508 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 ACCSQ96QU6 501 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 NACC1Q96RE7 527 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 SEC62Q99442 399 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 RIOK1Q9BRS2 568 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 UBE2OQ9C0C9 1292 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 FAM204AQ9H8W3 233 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TLR7Q9NYK1 1049 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 PALD1Q9ULE6 856 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 PTGS1P23219 599 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 ATP5DP30049 168 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 LIFRP42702 1097 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 PLCB3Q01970 1234 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TKFCQ3LXA3 575 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TCP11Q8WWU5 503 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 GPKOWQ92917 476 aaPredicted RBP eCLIP4.67□□□□□ -1.66
CFTR-201ENST00000003084 FAM167AQ96KS9 214 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TMEM206Q9H813 350 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 LARSQ9P2J5 1176 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 SPOPO43791 374 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 ZSCAN20P17040 1043 aaPredicted RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 KRT9P35527 623 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 FANCCQ00597 558 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 CDC37Q16543 378 aaPredicted RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 KCTD1Q719H9 257 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 COA7Q96BR5 231 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 ANKRD36BP1Q96IX9 119 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 POLR3GO15318 223 aaPredicted RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 JAK2O60674 1132 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 XRCC5P13010 732 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 NDUFV2P19404 249 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 EIF2AK2P19525 551 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 RPS12P25398 132 aaKnown RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 PLA2G4AP47712 749 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 CALCOCO2Q13137 446 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 PDZD4Q76G19 769 aaPredicted RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 SH3RF3Q8TEJ3 882 aaPredicted RBP4.67□□□□□ -1.66
CFTR-201ENST00000003084 RPS6KC1Q96S38 1066 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 ZMYND15Q9H091 742 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 STIM2Q9P246 746 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TXNDC16Q9P2K2 825 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 STK17AQ9UEE5 414 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 TPCN1Q9ULQ1 816 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 UTYO14607 1347 aa4.67□□□□□ -1.66
CFTR-201ENST00000003084 BRD1O95696 1058 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 ERCC5P28715 1186 aaPredicted RBP4.66□□□□□ -1.66
CFTR-201ENST00000003084 ALDH3A1P30838 453 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 KCNQ4P56696 695 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 USP46P62068 366 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 PSMD2Q13200 908 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 NFIXQ14938 502 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 NKX1-1Q15270 411 aaPredicted RBP4.66□□□□□ -1.66
CFTR-201ENST00000003084 ALX1Q15699 326 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 GBP6Q6ZN66 633 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 SEPT14Q6ZU15 432 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 CROCCP2Q86T23 111 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 CCDC114Q96M63 670 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 TIGD1Q96MW7 591 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 PIGSQ96S52 555 aa4.66□□□□□ -1.66
CFTR-201ENST00000003084 GINM1Q9NU53 330 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms