RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Men1O88559 611 aaKnown RBP14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Fhdc1Q3ULZ2 1149 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 MyrflQ3UN70 904 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Gngt1Q61012 74 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 AsnsQ61024 561 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Trpc6Q61143 930 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ddx3xQ62167 662 aaKnown RBP14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Sh3gl1Q62419 368 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Sh3gl2Q62420 352 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ccdc189Q6NZQ0 333 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Spag7Q7TNE3 227 aaKnown RBP14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Ttc7aQ8BGB2 858 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 F13a1Q8BH61 732 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Spata2Q8K004 515 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Slc44a4Q91VA1 707 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Trmt44Q9D2Q2 713 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Coro7Q9D2V7 922 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Znf287Q9EQB9 759 aa14.27□□□□□ -0.12
Nup88-203ENSMUST00000108531 Il27raO70394 623 aa14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 Kcnma1Q08460 1209 aa14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 PnocQ64387 187 aa14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 Atxn2lQ7TQH0 1049 aaKnown RBP14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 Slc13a4Q8BZ82 625 aa14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 TxlnbQ8VBT1 685 aa14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 Hps4Q99KG7 671 aa14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ccdc43Q9CR29 222 aaKnown RBP14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 Smco2Q9DA21 347 aa14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 Sertad1Q9JL10 236 aa14.27□□□□□ -0.13
Nup88-203ENSMUST00000108531 Gm4985A2ALC6 410 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 UncxO08934 530 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Nr1i3O35627 358 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Pla2g4eQ50L42 875 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Gas8Q60779 478 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Mapk6Q61532 720 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 LgsnQ8CIX8 563 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Klhl20Q8VCK5 604 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Haus2Q9CQS9 234 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Six6os1Q9CTN5 574 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Lrrc57Q9D1G5 239 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Nxnl2Q9D531 156 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Nol7Q9D7Z3 254 aaKnown RBP14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Vmn2r68L7N2B3 851 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Actn4P57780 912 aaKnown RBP14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Setd4P58467 439 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Sf3b2Q3UJB0 878 aaKnown RBP14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Tax1bp1Q3UKC1 814 aaKnown RBP14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 DaglaQ6WQJ1 1044 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Rexo1Q7TT28 1213 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Cog5Q8C0L8 829 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Pym1Q8CHP5 203 aaKnown RBP14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Mettl5Q8K1A0 209 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Onecut3Q8K557 490 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Rbm5Q91YE7 815 aaKnown RBP14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ddah1Q9CWS0 285 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Sh2b2Q9JID9 621 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Tsc2Q61037 1814 aa14.26□□□□□ -0.13
Nup88-203ENSMUST00000108531 Nme9A0A1L1SUL6 329 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Trim30cD3YVI9 513 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Fgd3O88842 733 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Nap1l1P28656 391 aaKnown RBP14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Sept2P42208 361 aaKnown RBP14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Gm5169Q5M8P2 212 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ncapg2Q6DFV1 1138 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Exoc3Q6KAR6 755 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Clca4aQ6Q473 924 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Usp17leQ7M764 540 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Rufy1Q8BIJ7 712 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Kiaa0319lQ8K135 1048 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Slc5a4bQ91ZP4 660 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Eps8l2Q99K30 729 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 1700020D05RikQ99PB1 294 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Luc7lQ9CYI4 371 aaKnown RBP14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Tjap1Q9DCD5 539 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 TicrrQ8BQ33 1889 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Kif13bA0A286YCV9 1847 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Fam178bQ24JP3 464 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 AopepQ8BXQ6 817 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 H6pdQ8CFX1 789 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Lmbrd1Q8K0B2 537 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 RtcbQ99LF4 505 aaKnown RBP14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 4931423N10RikQ9D4J9 382 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 Inpp4aQ9EPW0 939 aa14.25□□□□□ -0.13
Nup88-203ENSMUST00000108531 E9QMW4 1145 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Zfpm1O35615 995 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Grem2O88273 168 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 XlrP05531 208 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Gad1P48318 593 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Serpinb6dQ3UWK8 375 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Lrrcc1Q69ZB0 1026 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Thap3Q8BJ25 218 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Traf3ip3Q8C0G2 513 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Bbs7Q8K2G4 715 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Spata17Q9D552 379 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ccdc89Q9DA73 370 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ccnt1Q9QWV9 724 aaKnown RBP14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Sept3Q9Z1S5 350 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Senp1P59110 640 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Gjb6P70689 261 aa14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 NkrfQ8BY02 690 aaKnown RBP14.24□□□□□ -0.13
Nup88-203ENSMUST00000108531 Mtmr4Q91XS1 1190 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms