RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 SNX29Q8TEQ0 813 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 CRYGNQ8WXF5 182 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 NAP1L4Q99733 375 aaKnown RBP12.12□□□□□ -0.47
TARDBP-230ENST00000639083 DEFB129Q9H1M3 183 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 FBXO28Q9NVF7 368 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 CYP3A7-CYP3A51PA0A087WV96 503 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 RHOBTB3O94955 611 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 CYP3A7P24462 503 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 CCZ1BP86790 482 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 CCZ1P86791 482 aaPredicted RBP12.12□□□□□ -0.47
TARDBP-230ENST00000639083 VSTM4Q8IW00 320 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 TBC1D5Q92609 795 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 CDK5RAP3Q96JB5 506 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 C7orf25Q9BPX7 421 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 BLOC1S4Q9NUP1 217 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 RWDD2AQ9UIY3 292 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 FOSP01100 380 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-230ENST00000639083 AMPD3Q01432 767 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 PAK1Q13153 545 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 MCM6Q14566 821 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 ECM1Q16610 540 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 TPD52L1Q16890 204 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-230ENST00000639083 PRR16Q569H4 304 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 CDKAL1Q5VV42 579 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 SV2BQ7L1I2 683 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.472e-11■■■□□ 15.1
TARDBP-230ENST00000639083 FEZ1Q99689 392 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 KCNMB3Q9NPA1 279 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 R3HCC1Q9Y3T6 440 aaKnown RBP12.11□□□□□ -0.47
TARDBP-230ENST00000639083 ARFGEF1Q9Y6D6 1849 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 CFBP00751 764 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 SFPQP23246 707 aaKnown RBP eCLIP12.11□□□□□ -0.47
TARDBP-230ENST00000639083 ASIC1P78348 528 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 KIF4BQ2VIQ3 1234 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 NBPF12Q5TAG4 269 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-230ENST00000639083 MCTP2Q6DN12 878 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 APTXQ7Z2E3 356 aaKnown RBP12.11□□□□□ -0.47
TARDBP-230ENST00000639083 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 ADSSL1Q8N142 457 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 MBOAT7Q96N66 472 aa12.11□□□□□ -0.47
TARDBP-230ENST00000639083 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
TARDBP-230ENST00000639083 MYH7BA7E2Y1 1941 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 PLA2G6O60733 806 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 INPP5BP32019 993 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 SREBF1P36956 1147 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 NR1I3Q14994 352 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 FAM160B2Q86V87 743 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
TARDBP-230ENST00000639083 LARP4BQ92615 738 aaKnown RBP12.1□□□□□ -0.47
TARDBP-230ENST00000639083 STK17AQ9UEE5 414 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 FEM1BQ9UK73 627 aa12.1□□□□□ -0.47
TARDBP-230ENST00000639083 A0A1B0GTH6 734 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 MYMKA6NI61 221 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 PIK3CDO00329 1044 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 PDE4DQ08499 809 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 STK4Q13043 487 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 TRAF1Q13077 416 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 PRAMEF18Q5VWM3 479 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 MOXD1Q6UVY6 613 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 CCDC150Q8NCX0 1101 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 TRIM49BA6NDI0 452 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 TEX33O43247 280 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 CTNND1O60716 968 aaKnown RBP12.09□□□□□ -0.47
TARDBP-230ENST00000639083 FCER1AP12319 257 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 STAT3P40763 770 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 PMS1P54277 932 aaKnown RBP12.09□□□□□ -0.47
TARDBP-230ENST00000639083 GOLGA8FQ08AF8 430 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 GOLGA8DPQ0D2H9 430 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 SEMA3FQ13275 785 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 DGKZQ13574 1117 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 TMEM119Q4V9L6 283 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 SLFN12Q8IYM2 578 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 ETNPPLQ8TBG4 499 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 RAD54LQ92698 747 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 LENG9Q96B70 501 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 EXOC1Q9NV70 894 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
TARDBP-230ENST00000639083 H7C1D1 291 aa12.08□□□□□ -0.48
TARDBP-230ENST00000639083 CCT6AP40227 531 aaKnown RBP12.08□□□□□ -0.48
TARDBP-230ENST00000639083 Q4G0T1 1027 aa12.08□□□□□ -0.48
TARDBP-230ENST00000639083 SPECC1LQ69YQ0 1117 aa12.08□□□□□ -0.48
TARDBP-230ENST00000639083 ARHGAP27Q6ZUM4 889 aa12.08□□□□□ -0.48
TARDBP-230ENST00000639083 LDHDQ86WU2 507 aa12.08□□□□□ -0.48
TARDBP-230ENST00000639083 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.48
TARDBP-230ENST00000639083 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
TARDBP-230ENST00000639083 CCDC47Q96A33 483 aaKnown RBP12.08□□□□□ -0.48
TARDBP-230ENST00000639083 ADD3Q9UEY8 706 aaKnown RBP12.08□□□□□ -0.48
TARDBP-230ENST00000639083 GCOM1H8Y6P7 765 aaPredicted RBP12.08□□□□□ -0.48
TARDBP-230ENST00000639083 POLR2MP0CAP2 368 aa12.08□□□□□ -0.48
TARDBP-230ENST00000639083 ZNF76P36508 570 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms