RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), human

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-216	ENST00000638448	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	FIBCD1	Q8N539	461 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	DCAF4	Q8WV16	495 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	BTN2A2	Q8WVV5	523 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	COPS5	Q92905	334 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	TOX2	Q96NM4	488 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	PRDM14	Q9GZV8	571 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	SLC52A2	Q9HAB3	445 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	SP110	Q9HB58	689 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	NPFFR2	Q9Y5X5	522 aa		4.08	□□□□□ -1.76
GYPB-216	ENST00000638448	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	NFIB	O00712	420 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	KCNH1	O95259	989 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	GSN	P06396	782 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	ZGLP1	P0C6A0	271 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	SDS	P20132	328 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	ENDOU	P21128	410 aa	Known RBP	4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	AMPD2	Q01433	879 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	POU4F1	Q01851	419 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	KRTAP19-4	Q3LI73	84 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	TIGD5	Q53EQ6	642 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	RNF219	Q5W0B1	726 aa	Predicted RBP	4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	E4F1	Q66K89	784 aa	Predicted RBP	4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	DDX46	Q7L014	1031 aa	Known RBP	4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	JAML	Q86YT9	394 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	SLC7A14	Q8TBB6	771 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	PPP1R14A	Q96A00	147 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	C19orf44	Q9H6X5	657 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	FAM86C1	Q9NVL1	165 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	CHPF2	Q9P2E5	772 aa		4.07	□□□□□ -1.76
GYPB-216	ENST00000638448	PHLDB1	Q86UU1	1377 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	TCRBV16S1A1N1	A0A5B0	115 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	NPIPB6	E9PJ23	425 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	WNT9A	O14904	365 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	ZEB2	O60315	1214 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	BMP8B	P34820	402 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	NMI	Q13287	307 aa	Predicted RBP	4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	NTRK3	Q16288	839 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	BRDT	Q58F21	947 aa	Predicted RBP	4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	RCSD1	Q6JBY9	416 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	ZNF655	Q8N720	491 aa	Predicted RBP	4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	TMEM145	Q8NBT3	493 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	DAGLB	Q8NCG7	672 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	PDZD8	Q8NEN9	1154 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	ADCY4	Q8NFM4	1077 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	NOL6	Q9H6R4	1146 aa	Known RBP	4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	CD320	Q9NPF0	282 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	GPR27	Q9NS67	375 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	CHST7	Q9NS84	486 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	FBXL21	Q9UKT6	434 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	FAN1	Q9Y2M0	1017 aa		4.06	□□□□□ -1.76
GYPB-216	ENST00000638448	TRBV23OR9-2	A0A075B6M9	112 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	FITM1	A5D6W6	292 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448		K7ESF4	209 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	ARVCF	O00192	962 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	ETV2	O00321	342 aa	Predicted RBP	4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	GPR39	O43194	453 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	SNRPB2	P08579	225 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	MED14OS	P0DP75	135 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	BPI	P17213	487 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	TEK	Q02763	1124 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	CYP4F3	Q08477	520 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	KCNAB2	Q13303	367 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	EEF1DP3	Q658K8	133 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	IQCE	Q6IPM2	695 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	ATG14	Q6ZNE5	492 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	UBE2R2	Q712K3	238 aa	Predicted RBP	4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	KREMEN2	Q8NCW0	462 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	NPLOC4	Q8TAT6	608 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	JDP2	Q8WYK2	163 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	SCLY	Q96I15	445 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	C8orf48	Q96LL4	319 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	CAMKK2	Q96RR4	588 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	DSCC1	Q9BVC3	393 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	HDAC8	Q9BY41	377 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	PUS7L	Q9H0K6	701 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	GFOD1	Q9NXC2	390 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	EBF1	Q9UH73	591 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	NDOR1	Q9UHB4	597 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	APOBEC2	Q9Y235	224 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	SPEF1	Q9Y4P9	236 aa		4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	TNPO3	Q9Y5L0	923 aa	Known RBP	4.05	□□□□□ -1.76
GYPB-216	ENST00000638448	WASHC2C	Q9Y4E1	1318 aa		4.04	□□□□□ -1.76
GYPB-216	ENST00000638448	E2F8	A0AVK6	867 aa		4.04	□□□□□ -1.76
GYPB-216	ENST00000638448	TCAF2	A6NFQ2	919 aa		4.04	□□□□□ -1.76
GYPB-216	ENST00000638448	KRTAP9-7	A8MTY7	169 aa		4.04	□□□□□ -1.76
GYPB-216	ENST00000638448	AURKA	O14965	403 aa		4.04	□□□□□ -1.76
GYPB-216	ENST00000638448	OPA1	O60313	960 aa		4.04	□□□□□ -1.76
GYPB-216	ENST00000638448	PRAMEF1	O95521	474 aa		4.04	□□□□□ -1.76
GYPB-216	ENST00000638448	TMEM253	P0C7T8	217 aa		4.04	□□□□□ -1.76
GYPB-216	ENST00000638448	ZSCAN22	P10073	491 aa	Predicted RBP	4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms