RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 CCDC38Q502W7 563 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 C1orf228Q6PIY5 440 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 ARMC9Q7Z3E5 817 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 GBP5Q96PP8 586 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 WBP4O75554 376 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 IFNLR1Q8IU57 520 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 FAM149B1Q96BN6 582 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 PCDHA1Q9Y5I3 950 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 CFAP43Q8NDM7 1665 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 SRGAP2BP0DMP2 458 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 BBS5Q8N3I7 341 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 A0A1B0GUA9 196 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 MESDQ14696 234 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 ZBTB33Q86T24 672 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 ATP1A2P50993 1020 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 IRX4P78413 519 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 CDKL2Q92772 493 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 CARD14Q9BXL6 1004 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 COL4A3BPQ9Y5P4 624 aa17.38■□□□□ 0.37
CACNA1A-221ENST00000636012 RPN1P04843 607 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 CCND2P30279 289 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 SNX1Q13596 522 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 ODR4Q5SWX8 454 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 TRIM58Q8NG06 486 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 SLITRK6Q9H5Y7 841 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 TTC1Q99614 292 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 ZBED2Q9BTP6 218 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 INHBAP08476 426 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 CHRNDQ07001 517 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 HIF1AQ16665 826 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 MAP3K21Q5TCX8 1036 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 DNAAF3Q8N9W5 541 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 GNGT2O14610 69 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 PTK2Q05397 1052 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 RBM46Q8TBY0 533 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 ABTB1Q969K4 478 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 DSCC1Q9BVC3 393 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 DBNDD1Q9H9R9 158 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 FGD4Q96M96 766 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 ZMYM6O95789 1325 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 YWHAGP61981 247 aaKnown RBP eCLIP17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 TFAMQ00059 246 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 RNF168Q8IYW5 571 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
CACNA1A-221ENST00000636012 CNKSR1Q969H4 720 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 XPO4Q9C0E2 1151 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 MOSPD1Q9UJG1 213 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 PPFIA4O75335 1185 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 PTGDRQ13258 359 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 ME3Q16798 604 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 KMT5AQ9NQR1 393 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 ZNF804BA4D1E1 1349 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 DYNLT1P63172 113 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 TTLL7Q6ZT98 887 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 KLHL14Q9P2G3 628 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 RAD17O75943 681 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 GDAP1Q8TB36 358 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 A6NNZ2 444 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 ELF1P32519 619 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 NSFP46459 744 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 TUBB8Q3ZCM7 444 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 ANGPTL8Q6UXH0 198 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 OR8K1Q8NGG5 319 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 MTRQ99707 1265 aa17.36■□□□□ 0.37
CACNA1A-221ENST00000636012 MED23Q9ULK4 1368 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 LRRN2O75325 713 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 SRGAP2CP0DJJ0 459 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 SCG2P13521 617 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 LARSQ9P2J5 1176 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 FAF1Q9UNN5 650 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 SLC8A2Q9UPR5 921 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 ACTN1P12814 892 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 EXOC3L4Q17RC7 722 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 MIGA2Q7L4E1 593 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 OAS2P29728 719 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 CACTINQ8WUQ7 758 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 SUPT20HL1Q3ZLR7 823 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 KCTD6Q8NC69 237 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 PCIF1Q9H4Z3 704 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 ARHGAP25P42331 645 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 STAT2P52630 851 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 PDE1BQ01064 536 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 LLGL1Q15334 1064 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 EEF1GP26641 437 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 CLIC6Q96NY7 704 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 KRT82Q9NSB4 513 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 ORC6Q9Y5N6 252 aa17.35■□□□□ 0.37
CACNA1A-221ENST00000636012 HLA-DPA1P20036 260 aa17.34■□□□□ 0.37
CACNA1A-221ENST00000636012 MAP3K7CLP57077 242 aa17.34■□□□□ 0.37
CACNA1A-221ENST00000636012 ANXA13P27216 316 aa17.34■□□□□ 0.37
CACNA1A-221ENST00000636012 DAB2P98082 770 aa17.34■□□□□ 0.37
CACNA1A-221ENST00000636012 NXF1Q9UBU9 619 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-221ENST00000636012 PNMA2Q9UL42 364 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms