RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 POTEMA6NI47 508 aa20.79■□□□□ 0.92
PCDHB2-202ENST00000622947 SMTNL1A8MU46 457 aa20.79■□□□□ 0.92
PCDHB2-202ENST00000622947 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.79■□□□□ 0.92
PCDHB2-202ENST00000622947 TRMT44Q8IYL2 757 aaKnown RBP20.79■□□□□ 0.92
PCDHB2-202ENST00000622947 C17orf53Q8N3J3 647 aaPredicted RBP20.79■□□□□ 0.92
PCDHB2-202ENST00000622947 MRFAP1L1Q96HT8 127 aa20.79■□□□□ 0.92
PCDHB2-202ENST00000622947 NUDT12Q9BQG2 462 aa20.79■□□□□ 0.92
PCDHB2-202ENST00000622947 SH2D4AQ9H788 454 aa20.79■□□□□ 0.92
PCDHB2-202ENST00000622947 GTPBP6O43824 516 aaPredicted RBP20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 PLA2G6O60733 806 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 CHURC1Q8WUH1 139 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 CCDC34Q96HJ3 373 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 SYT17Q9BSW7 474 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 KBTBD4Q9NVX7 518 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 FANCLQ9NW38 375 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 GGA3Q9NZ52 723 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 DOCK1Q14185 1865 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 DDNO94850 711 aaPredicted RBP20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 AP3B2Q13367 1082 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 ZKSCAN4Q969J2 545 aaPredicted RBP20.78■□□□□ 0.92
PCDHB2-202ENST00000622947 TPM3P06753 285 aa20.77■□□□□ 0.92
PCDHB2-202ENST00000622947 YBX3P16989 372 aaKnown RBP eCLIP20.77■□□□□ 0.92
PCDHB2-202ENST00000622947 USP11P51784 963 aa20.77■□□□□ 0.92
PCDHB2-202ENST00000622947 ARHGAP4P98171 946 aa20.77■□□□□ 0.92
PCDHB2-202ENST00000622947 RASSF8Q8NHQ8 419 aa20.77■□□□□ 0.92
PCDHB2-202ENST00000622947 MBOAT7Q96N66 472 aa20.77■□□□□ 0.92
PCDHB2-202ENST00000622947 CYP3A7-CYP3A51PA0A087WV96 503 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 GOLGA6L6A8MZA4 724 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 PPP1R3GB7ZBB8 358 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 PTGS1P23219 599 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 CYP3A7P24462 503 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 CDC25BP30305 580 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 SLC20A2Q08357 652 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 GRB10Q13322 594 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 DLK2Q6UY11 383 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 KIAA1683Q9H0B3 1180 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 LRWD1Q9UFC0 647 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 ZNF112Q9UJU3 913 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 FEM1BQ9UK73 627 aa20.77■□□□□ 0.91
PCDHB2-202ENST00000622947 SSC5DA1L4H1 1573 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 IRX5P78411 483 aaPredicted RBP20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 SYCP1Q15431 976 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 CCDC186Q7Z3E2 898 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 PNMA5Q96PV4 448 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 XPO4Q9C0E2 1151 aaKnown RBP20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 KCNMB3Q9NPA1 279 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 IFNKQ9P0W0 207 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 CCDC66A2RUB6 948 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 GCFC2P16383 781 aaKnown RBP20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 HSP90AA4PQ58FG1 418 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 FAM160B2Q86V87 743 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 APOBEC3FQ8IUX4 373 aaKnown RBP20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 DRC7Q8IY82 874 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 LENG9Q96B70 501 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 EMILIN3Q9NT22 766 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 ZNF536O15090 1300 aa20.76■□□□□ 0.91
PCDHB2-202ENST00000622947 FAM86B1E9PN63 330 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 PIK3CDO00329 1044 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 KLRC4O43908 158 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 RPN1P04843 607 aaKnown RBP20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 FAM86B2P0C5J1 330 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 SREBF1P36956 1147 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 MTMR2Q13614 643 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 PDIA5Q14554 519 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 ECM1Q16610 540 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 PHIPQ8WWQ0 1821 aa20.75■□□□□ 0.91
PCDHB2-202ENST00000622947 FANCCQ00597 558 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 ENOX1Q8TC92 643 aaKnown RBP20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 WRNIP1Q96S55 665 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 BLOC1S4Q9NUP1 217 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 CFBP00751 764 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 LDHDQ86WU2 507 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 CYP2W1Q8TAV3 490 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 KIAA1524Q8TCG1 905 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 AGBL1Q96MI9 1066 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 NFE2L3Q9Y4A8 694 aa20.74■□□□□ 0.91
PCDHB2-202ENST00000622947 PARP14Q460N5 1801 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 SPDYE3A6NKU9 549 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 ZNF18P17022 549 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 SPP2Q13103 211 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 KLHL10Q6JEL2 608 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 KCNK18Q7Z418 384 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 FCHSD1Q86WN1 690 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 WDR46O15213 610 aaKnown RBP20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 COBLO75128 1261 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 FOSP01100 380 aaPredicted RBP20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 STX17P56962 302 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 ARID5BQ14865 1188 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 TMEM266Q2M3C6 531 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 DCAF15Q66K64 600 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 SCYL3Q8IZE3 742 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 ETNPPLQ8TBG4 499 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 LPAR1Q92633 364 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 SAMSN1Q9NSI8 373 aaKnown RBP20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 GINM1Q9NU53 330 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 RNF181Q9P0P0 153 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 DACH1Q9UI36 760 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 PCDHA12Q9UN75 941 aa20.73■□□□□ 0.91
PCDHB2-202ENST00000622947 GDAQ9Y2T3 454 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms