RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 RMND1Q9NWS8 449 aa16.1■□□□□ 0.17
SYNRG-225ENST00000619541 GTPBP6O43824 516 aaPredicted RBP16.1■□□□□ 0.17
SYNRG-225ENST00000619541 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
SYNRG-225ENST00000619541 FAM228AQ86W67 206 aa16.1■□□□□ 0.17
SYNRG-225ENST00000619541 HVCN1Q96D96 273 aa16.1■□□□□ 0.17
SYNRG-225ENST00000619541 STAMBPL1Q96FJ0 436 aa16.1■□□□□ 0.17
SYNRG-225ENST00000619541 PLA2G12BQ9BX93 195 aa16.1■□□□□ 0.17
SYNRG-225ENST00000619541 SCTRP47872 440 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 ARID5AQ03989 594 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 LDHAL6AQ6ZMR3 332 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 FANCBQ8NB91 859 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 NSMCE1Q8WV22 266 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 SEC16BQ96JE7 1060 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 L3MBTL1Q9Y468 752 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 MBD4O95243 580 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 CTNNA1P35221 906 aaKnown RBP16.09■□□□□ 0.17
SYNRG-225ENST00000619541 SH3RF1Q7Z6J0 888 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 TBC1D1Q86TI0 1168 aaPredicted RBP16.09■□□□□ 0.17
SYNRG-225ENST00000619541 IRF2BP1Q8IU81 584 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 FERMT2Q96AC1 680 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 NOVA2Q9UNW9 492 aaKnown RBP16.09■□□□□ 0.17
SYNRG-225ENST00000619541 HGSO14964 777 aaPredicted RBP16.09■□□□□ 0.17
SYNRG-225ENST00000619541 ZNF263O14978 683 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 CTSWP56202 376 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 ZBED6P86452 979 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 RRAGAQ7L523 313 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 YTHDF3Q7Z739 585 aaKnown RBP16.09■□□□□ 0.17
SYNRG-225ENST00000619541 TANGO6Q9C0B7 1094 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 CCDC87Q9NVE4 849 aa16.09■□□□□ 0.17
SYNRG-225ENST00000619541 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 SMIM23A6NLE4 172 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 TMCO5BA8MYB1 307 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 PRKAB2O43741 272 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 MCAMP43121 646 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 KIF11P52732 1056 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 ANKRD20A8PQ5CZ79 823 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 WLSQ5T9L3 541 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 IQCKQ8N0W5 287 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 ZNF526Q8TF50 670 aaPredicted RBP16.08■□□□□ 0.17
SYNRG-225ENST00000619541 CNNM1Q9NRU3 951 aa16.08■□□□□ 0.17
SYNRG-225ENST00000619541 GKAP1Q5VSY0 366 aaPredicted RBP16.08■□□□□ 0.16
SYNRG-225ENST00000619541 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.16
SYNRG-225ENST00000619541 HMGB1P1B2RPK0 211 aaPredicted RBP16.08■□□□□ 0.16
SYNRG-225ENST00000619541 FAM133BQ5BKY9 247 aaKnown RBP16.08■□□□□ 0.16
SYNRG-225ENST00000619541 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
SYNRG-225ENST00000619541 CACNA2D4Q7Z3S7 1137 aa16.08■□□□□ 0.16
SYNRG-225ENST00000619541 DDX42Q86XP3 938 aaKnown RBP eCLIP16.08■□□□□ 0.16
SYNRG-225ENST00000619541 CCDC170Q8IYT3 715 aa16.08■□□□□ 0.16
SYNRG-225ENST00000619541 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
SYNRG-225ENST00000619541 PIH1D3Q9NQM4 214 aaKnown RBP16.08■□□□□ 0.16
SYNRG-225ENST00000619541 LEMD3Q9Y2U8 911 aa16.08■□□□□ 0.16
SYNRG-225ENST00000619541 KIF4AO95239 1232 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 ADD2P35612 726 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 IFFO1Q0D2I5 559 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 SGMS1Q86VZ5 419 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 ARMC2Q8NEN0 867 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
SYNRG-225ENST00000619541 CASKIN2Q8WXE0 1202 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 CAVIN3Q969G5 261 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 NOD2Q9HC29 1040 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 LRP6O75581 1613 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 EHHADHQ08426 723 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 FAM182BQ5T319 152 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 MIGA1Q8NAN2 632 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 ZBTB10Q96DT7 871 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 MTRQ99707 1265 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.07■□□□□ 0.16
SYNRG-225ENST00000619541 SPATS2LQ9NUQ6 558 aaKnown RBP16.07■□□□□ 0.16
SYNRG-225ENST00000619541 MTMR7Q9Y216 660 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 ERVV-1B6SEH8 477 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 NLRP5P59047 1200 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 IFNL3Q8IZI9 196 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 CNOT6LQ96LI5 555 aaKnown RBP16.07■□□□□ 0.16
SYNRG-225ENST00000619541 YIPF3Q9GZM5 350 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 GGT7Q9UJ14 662 aa16.07■□□□□ 0.16
SYNRG-225ENST00000619541 PP2D1A8MPX8 630 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 PDE6AP16499 860 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 LIFRP42702 1097 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 GFPT1Q06210 699 aaPredicted RBP16.06■□□□□ 0.16
SYNRG-225ENST00000619541 PLCB4Q15147 1175 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 AP1ARQ63HQ0 302 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 BAZ2BQ9UIF8 2168 aaKnown RBP16.06■□□□□ 0.16
SYNRG-225ENST00000619541 STK36Q9NRP7 1315 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 TLDC2A0PJX2 215 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 FAM170AA1A519 330 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 SNAP23O00161 211 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 MRPL12P52815 198 aaKnown RBP16.06■□□□□ 0.16
SYNRG-225ENST00000619541 ITGB3BPQ13352 177 aaPredicted RBP16.06■□□□□ 0.16
SYNRG-225ENST00000619541 ZKSCAN8Q15776 578 aaPredicted RBP16.06■□□□□ 0.16
SYNRG-225ENST00000619541 KRT71Q3SY84 523 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 BARGINQ6ZT62 677 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 MDM1Q8TC05 714 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 NOX5Q96PH1 765 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 SELENOSQ9BQE4 189 aa16.06■□□□□ 0.16
SYNRG-225ENST00000619541 NLRC4Q9NPP4 1024 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms