RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CCNE1P24864 410 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 HYIQ5T013 277 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 TTI2Q6NXR4 508 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 MTERF4Q7Z6M4 381 aaKnown RBP17.62■□□□□ 0.41
NR1H3-235ENST00000616973 REXO1L1PQ8IX06 675 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 OGFOD1Q8N543 542 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 FBXO41Q8TF61 875 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 ZNF592Q92610 1267 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 LARP4BQ92615 738 aaKnown RBP17.62■□□□□ 0.41
NR1H3-235ENST00000616973 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 GOLGA6L9A6NEM1 432 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 MEIS2O14770 477 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 RRP9O43818 475 aaKnown RBP17.62■□□□□ 0.41
NR1H3-235ENST00000616973 COBLO75128 1261 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 FECHP22830 423 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 RBL2Q08999 1139 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 TRIM14Q14142 442 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 FBXO11Q86XK2 927 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 AGBL3Q8NEM8 1001 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 SNX29Q8TEQ0 813 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 CRYGNQ8WXF5 182 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 RAD54LQ92698 747 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 MAP7D2Q96T17 732 aa17.62■□□□□ 0.41
NR1H3-235ENST00000616973 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 TRIM49BA6NDI0 452 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 POTEMA6NI47 508 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 TCP10L2B9ZVM9 353 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L15C9J2P7 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L13C9JLJ4 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L11C9JVI0 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L18D6R9N7 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L22D6RA61 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L17D6RBQ6 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L19D6RCP7 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L20D6RJB6 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 RAD17O75943 681 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 PMS1P54277 932 aaKnown RBP17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L24Q0WX57 530 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
NR1H3-235ENST00000616973 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 UNC13DQ70J99 1090 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 CNGA4Q8IV77 575 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 P2RX5Q93086 422 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 ARHGEF10LQ9HCE6 1279 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 KCNMB3Q9NPA1 279 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 ZNF277Q9NRM2 450 aaPredicted RBP17.61■□□□□ 0.41
NR1H3-235ENST00000616973 PCDHA12Q9UN75 941 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 PPP2R2CQ9Y2T4 447 aa17.61■□□□□ 0.41
NR1H3-235ENST00000616973 BRCA1P38398 1863 aaKnown RBP17.61■□□□□ 0.41
NR1H3-235ENST00000616973 A0A1W2PRG0 241 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 MYMKA6NI61 221 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 TBC1D12O60347 775 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 MFAP3LO75121 409 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 FOSP01100 380 aaPredicted RBP17.6■□□□□ 0.41
NR1H3-235ENST00000616973 CCT6AP40227 531 aaKnown RBP17.6■□□□□ 0.41
NR1H3-235ENST00000616973 ETF1P62495 437 aaKnown RBP17.6■□□□□ 0.41
NR1H3-235ENST00000616973 MCM6Q14566 821 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 TRIM47Q96LD4 638 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 NUP88Q99567 741 aaPredicted RBP17.6■□□□□ 0.41
NR1H3-235ENST00000616973 VPS16Q9H269 839 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 TAB2Q9NYJ8 693 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 ZNRF3Q9ULT6 936 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 TPM1P09493 284 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 STK4Q13043 487 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 TRAF1Q13077 416 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 DUSP9Q99956 384 aaKnown RBP17.6■□□□□ 0.41
NR1H3-235ENST00000616973 NUDT12Q9BQG2 462 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 SRRTQ9BXP5 876 aaKnown RBP17.6■□□□□ 0.41
NR1H3-235ENST00000616973 ATAD5Q96QE3 1844 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 PHLPP2Q6ZVD8 1323 aa17.6■□□□□ 0.41
NR1H3-235ENST00000616973 CLRN2A0PK11 232 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 GYPCP04921 128 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
NR1H3-235ENST00000616973 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 FAM83AQ86UY5 434 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 NIM1KQ8IY84 436 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 SLFN12Q8IYM2 578 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 NT5C3AQ9H0P0 336 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 TMX2Q9Y320 296 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 A0A1W2PQC6 194 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 LGALS16A8MUM7 142 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 TBX3O15119 743 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 MARCH6O60337 910 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 PSMD2Q13200 908 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 FAM114A1Q8IWE2 563 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 KIAA0895Q8NCT3 520 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 ZNF507Q8TCN5 953 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 ZBED3Q96IU2 234 aaPredicted RBP17.59■□□□□ 0.41
NR1H3-235ENST00000616973 L2HGDHQ9H9P8 463 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 GOPCQ9HD26 462 aa17.59■□□□□ 0.41
NR1H3-235ENST00000616973 MAGEC2Q9UBF1 373 aaPredicted RBP17.59■□□□□ 0.41
NR1H3-235ENST00000616973 FCER1AP12319 257 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 CASP14P31944 242 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 ARHGAP4P98171 946 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 EHHADHQ08426 723 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 IKQ13123 557 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-235ENST00000616973 Q4G0T1 1027 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 CENPPQ6IPU0 288 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms