RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 MCUR1Q96AQ8 359 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 INO80BQ9C086 356 aaPredicted RBP17.1■□□□□ 0.33
TNXB-208ENST00000611016 SEPT10Q9P0V9 454 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 HYOU1Q9Y4L1 999 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 BUB1O43683 1085 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 INPP5BP32019 993 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
TNXB-208ENST00000611016 FOXP1Q9H334 677 aaPredicted RBP17.1■□□□□ 0.33
TNXB-208ENST00000611016 APBA1Q02410 837 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 RPUSD2Q8IZ73 545 aaKnown RBP17.1■□□□□ 0.33
TNXB-208ENST00000611016 TBCKQ8TEA7 893 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 COA1Q9GZY4 146 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 KIF1BO60333 1816 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 RGS12O14924 1447 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 AOC3Q16853 763 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
TNXB-208ENST00000611016 SAR1BQ9Y6B6 198 aa17.1■□□□□ 0.33
TNXB-208ENST00000611016 KCNK3O14649 394 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 IRX4P78413 519 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 FAM81BQ96LP2 452 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 MYCP01106 439 aaPredicted RBP17.09■□□□□ 0.33
TNXB-208ENST00000611016 HECW2Q9P2P5 1572 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 CASQ2O14958 399 aaPredicted RBP17.09■□□□□ 0.33
TNXB-208ENST00000611016 COBLO75128 1261 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 SDCCAG8Q86SQ7 713 aaPredicted RBP17.09■□□□□ 0.33
TNXB-208ENST00000611016 EEF2KMTQ96G04 330 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
TNXB-208ENST00000611016 TYW1Q9NV66 732 aaKnown RBP17.09■□□□□ 0.33
TNXB-208ENST00000611016 FANCLQ9NW38 375 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 CTAGE3PQ8IX95 158 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 OSBP2Q969R2 916 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 PIM2Q9P1W9 311 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 LRFN2Q9ULH4 789 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 TACC3Q9Y6A5 838 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 SYNMO15061 1565 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 SPDYE16A6NNV3 312 aaPredicted RBP17.09■□□□□ 0.33
TNXB-208ENST00000611016 RNF40O75150 1001 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 MYL7Q01449 175 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 SLC10A4Q96EP9 437 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
TNXB-208ENST00000611016 RIOK3O14730 519 aaKnown RBP17.08■□□□□ 0.33
TNXB-208ENST00000611016 XPOTO43592 962 aaKnown RBP17.08■□□□□ 0.33
TNXB-208ENST00000611016 HLFQ16534 295 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 PALM2Q8IXS6 379 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 FAM114A2Q9NRY5 505 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 TTC37Q6PGP7 1564 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.33
TNXB-208ENST00000611016 VSIG1Q86XK7 387 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 CEP170P1Q96L14 293 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 WDR11Q9BZH6 1224 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 RIC8AQ9NPQ8 531 aa17.08■□□□□ 0.33
TNXB-208ENST00000611016 GOLGA8KD6RF30 607 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 HGSO14964 777 aaPredicted RBP17.08■□□□□ 0.32
TNXB-208ENST00000611016 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.32
TNXB-208ENST00000611016 RASGRF1Q13972 1273 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
TNXB-208ENST00000611016 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 TCP1P17987 556 aaKnown RBP17.08■□□□□ 0.32
TNXB-208ENST00000611016 SPATA1Q5VX52 437 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 NME8Q8N427 588 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 MRFAP1L1Q96HT8 127 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 HAUS4Q9H6D7 363 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 AFF2P51816 1311 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 EXOC3L4Q17RC7 722 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 PRPF31Q8WWY3 499 aaKnown RBP17.08■□□□□ 0.32
TNXB-208ENST00000611016 DESI2Q9BSY9 194 aa17.08■□□□□ 0.32
TNXB-208ENST00000611016 BZW2Q9Y6E2 419 aaKnown RBP17.08■□□□□ 0.32
TNXB-208ENST00000611016 MEIS1O00470 390 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 ANKRD36BP1Q96IX9 119 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 ZNF277Q9NRM2 450 aaPredicted RBP17.07■□□□□ 0.32
TNXB-208ENST00000611016 A0A1W2PQ27 194 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 A0A1W2PQ64 194 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 A0A1W2PQD8 194 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 EIF3CLB5ME19 914 aaKnown RBP17.07■□□□□ 0.32
TNXB-208ENST00000611016 TROVE2P10155 538 aaKnown RBP eCLIP17.07■□□□□ 0.32
TNXB-208ENST00000611016 EIF3CQ99613 913 aaKnown RBP17.07■□□□□ 0.32
TNXB-208ENST00000611016 PCDHB4Q9Y5E5 795 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 PFDN6O15212 129 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 ELF2Q15723 593 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 CSPG5O95196 566 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 NSFP46459 744 aaKnown RBP17.07■□□□□ 0.32
TNXB-208ENST00000611016 SH3BGRP55822 239 aaPredicted RBP17.07■□□□□ 0.32
TNXB-208ENST00000611016 CLEC4GQ6UXB4 293 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 KRT12Q99456 494 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
TNXB-208ENST00000611016 CDK8P49336 464 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 SNAP25P60880 206 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 NLRP7Q8WX94 980 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 CABS1Q96KC9 395 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 CACYBPQ9HB71 228 aaKnown RBP17.07■□□□□ 0.32
TNXB-208ENST00000611016 PRKAG2Q9UGJ0 569 aa17.07■□□□□ 0.32
TNXB-208ENST00000611016 KRIT1O00522 736 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 ADCY8P40145 1251 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 CDHR1Q96JP9 859 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms