RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 TOX2Q96NM4 488 aa22.35■■□□□ 1.17
TCF3-219ENST00000610756 EPB41L2O43491 1005 aaKnown RBP22.34■■□□□ 1.17
TCF3-219ENST00000610756 ZEB2O60315 1214 aa22.34■■□□□ 1.17
TCF3-219ENST00000610756 HSPA4P34932 840 aa22.34■■□□□ 1.17
TCF3-219ENST00000610756 CDK7P50613 346 aa22.34■■□□□ 1.17
TCF3-219ENST00000610756 BEX3Q00994 111 aa22.34■■□□□ 1.17
TCF3-219ENST00000610756 STXBP2Q15833 593 aa22.34■■□□□ 1.17
TCF3-219ENST00000610756 SYNE3Q6ZMZ3 975 aa22.34■■□□□ 1.17
TCF3-219ENST00000610756 ANKRD33Q7Z3H0 272 aa22.34■■□□□ 1.17
TCF3-219ENST00000610756 SRBD1Q8N5C6 995 aaKnown RBP22.34■■□□□ 1.17
TCF3-219ENST00000610756 RRP36Q96EU6 259 aaKnown RBP22.34■■□□□ 1.17
TCF3-219ENST00000610756 NKRFO15226 690 aaKnown RBP eCLIP22.33■■□□□ 1.17
TCF3-219ENST00000610756 CABYRO75952 493 aa22.33■■□□□ 1.17
TCF3-219ENST00000610756 ARHGEF16Q5VV41 709 aa22.33■■□□□ 1.17
TCF3-219ENST00000610756 VTI1AQ96AJ9 217 aa22.33■■□□□ 1.17
TCF3-219ENST00000610756 LCTP09848 1927 aa22.33■■□□□ 1.17
TCF3-219ENST00000610756 GCOM1H8Y6P7 765 aaPredicted RBP22.32■■□□□ 1.16
TCF3-219ENST00000610756 EIF3JO75822 258 aaKnown RBP22.32■■□□□ 1.16
TCF3-219ENST00000610756 POLR2MP0CAP2 368 aa22.32■■□□□ 1.16
TCF3-219ENST00000610756 PTGS1P23219 599 aa22.32■■□□□ 1.16
TCF3-219ENST00000610756 FXR1P51114 621 aaKnown RBP eCLIP22.32■■□□□ 1.16
TCF3-219ENST00000610756 LBHD1Q9BQE6 289 aaPredicted RBP22.32■■□□□ 1.16
TCF3-219ENST00000610756 PDLIM7Q9NR12 457 aa22.32■■□□□ 1.16
TCF3-219ENST00000610756 PXMP2Q9NR77 195 aa22.32■■□□□ 1.16
TCF3-219ENST00000610756 TRIOBPQ9H2D6 2365 aa22.32■■□□□ 1.16
TCF3-219ENST00000610756 DCDC2CA8MYV0 355 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 PLEKHA8P1O95397 391 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 NR3C2P08235 984 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 RXRAP19793 462 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 TTLL4Q14679 1199 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 PPP2R5BQ15173 497 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 CCDC62Q6P9F0 684 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 APOA5Q6Q788 366 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 PIBF1Q8WXW3 757 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 SNX14Q9Y5W7 946 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 A0A0U1RQG5 324 aaPredicted RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 TRIM43BA6NCK2 446 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 ARVCFO00192 962 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 PQBP1O60828 265 aaKnown RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 SLC34A2O95436 690 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 CLTBP09497 229 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 TXNP10599 105 aaKnown RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 EIF2AK2P19525 551 aaKnown RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 HOXA13P31271 388 aaPredicted RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 MDM2Q00987 491 aaPredicted RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 FAAP100Q0VG06 881 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 CXCL17Q6UXB2 119 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 SH3RF1Q7Z6J0 888 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 CMTR1Q8N1G2 835 aaKnown RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 SLC43A3Q8NBI5 491 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 TRIM43Q96BQ3 446 aaPredicted RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 TCEANC2Q96MN5 208 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 SEZ6LQ9BYH1 1024 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 UBE2OQ9C0C9 1292 aaKnown RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 SEC63Q9UGP8 760 aaKnown RBP22.31■■□□□ 1.16
TCF3-219ENST00000610756 BRPF3Q9ULD4 1205 aa22.31■■□□□ 1.16
TCF3-219ENST00000610756 MROH7Q68CQ1 1323 aa22.3■■□□□ 1.16
TCF3-219ENST00000610756 CPT1AP50416 773 aa22.3■■□□□ 1.16
TCF3-219ENST00000610756 TMTC3Q6ZXV5 915 aa22.3■■□□□ 1.16
TCF3-219ENST00000610756 VSIG10LQ86VR7 867 aa22.3■■□□□ 1.16
TCF3-219ENST00000610756 PDCD2LQ9BRP1 358 aa22.3■■□□□ 1.16
TCF3-219ENST00000610756 PRDM5Q9NQX1 630 aaPredicted RBP22.3■■□□□ 1.16
TCF3-219ENST00000610756 BAZ2BQ9UIF8 2168 aaKnown RBP22.29■■□□□ 1.16
TCF3-219ENST00000610756 A6NJR5 290 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 KIAA0355O15063 1070 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 SEPT14Q6ZU15 432 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 MICU3Q86XE3 530 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 RAB11FIP4Q86YS3 637 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 FBXL16Q8N461 479 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 OR6J1Q8NGC5 347 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 TMEM39AQ9NV64 488 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 POLR3EQ9NVU0 708 aa22.29■■□□□ 1.16
TCF3-219ENST00000610756 RBM28Q9NW13 759 aaKnown RBP22.29■■□□□ 1.16
TCF3-219ENST00000610756 LAMA3Q16787 3333 aa22.28■■□□□ 1.16
TCF3-219ENST00000610756 ZBTB43O43298 467 aa22.28■■□□□ 1.16
TCF3-219ENST00000610756 ARIH2O95376 493 aa22.28■■□□□ 1.16
TCF3-219ENST00000610756 RCAN1P53805 252 aa22.28■■□□□ 1.16
TCF3-219ENST00000610756 BRDTQ58F21 947 aaPredicted RBP22.28■■□□□ 1.16
TCF3-219ENST00000610756 TDHQ8IZJ6 230 aa22.28■■□□□ 1.16
TCF3-219ENST00000610756 CCDC82Q8N4S0 544 aa22.28■■□□□ 1.16
TCF3-219ENST00000610756 JAKMIP1Q96N16 626 aaKnown RBP22.28■■□□□ 1.16
TCF3-219ENST00000610756 PCDH10Q9P2E7 1040 aa22.28■■□□□ 1.16
TCF3-219ENST00000610756 GRIN2DO15399 1336 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 LRRC37A2A6NM11 1700 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 KPNA6O60684 536 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 PSMA5P28066 241 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 ITGA7Q13683 1181 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 PGM5Q15124 567 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 BLOC1S2Q6QNY1 142 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 FCHSD1Q86WN1 690 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 COPS5Q92905 334 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 USP26Q9BXU7 913 aa22.27■■□□□ 1.16
TCF3-219ENST00000610756 DDX41Q9UJV9 622 aaKnown RBP22.27■■□□□ 1.16
TCF3-219ENST00000610756 PIK3CDO00329 1044 aa22.26■■□□□ 1.15
TCF3-219ENST00000610756 CPA1P15085 419 aa22.26■■□□□ 1.15
TCF3-219ENST00000610756 FGD1P98174 961 aa22.26■■□□□ 1.15
TCF3-219ENST00000610756 PURAQ00577 322 aaKnown RBP22.26■■□□□ 1.15
TCF3-219ENST00000610756 LY6KQ17RY6 165 aa22.26■■□□□ 1.15
TCF3-219ENST00000610756 BADQ92934 168 aa22.26■■□□□ 1.15
TCF3-219ENST00000610756 MYH6P13533 1939 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms