RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 PARP1P09874 1014 aaKnown RBP17.69■□□□□ 0.42
TGFB1-202ENST00000597453 CCL23P55773 120 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 SEC23AQ15436 765 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 IFIT1BQ5T764 474 aaKnown RBP17.69■□□□□ 0.42
TGFB1-202ENST00000597453 STAG2Q8N3U4 1231 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 SYTL5Q8TDW5 730 aaPredicted RBP17.69■□□□□ 0.42
TGFB1-202ENST00000597453 SCFD2Q8WU76 684 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 PPP1R13LQ8WUF5 828 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 TAAR1Q96RJ0 339 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 MPHOSPH6Q99547 160 aaKnown RBP17.69■□□□□ 0.42
TGFB1-202ENST00000597453 WNT8AQ9H1J5 351 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 VAT1LQ9HCJ6 419 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 TRMT13Q9NUP7 481 aaKnown RBP17.69■□□□□ 0.42
TGFB1-202ENST00000597453 RAD50Q92878 1312 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 MYO9BQ13459 2157 aa17.69■□□□□ 0.42
TGFB1-202ENST00000597453 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
TGFB1-202ENST00000597453 TXNP10599 105 aaKnown RBP17.68■□□□□ 0.42
TGFB1-202ENST00000597453 PBX2P40425 430 aa17.68■□□□□ 0.42
TGFB1-202ENST00000597453 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.68■□□□□ 0.42
TGFB1-202ENST00000597453 MAFAQ8NHW3 353 aaPredicted RBP17.68■□□□□ 0.42
TGFB1-202ENST00000597453 MTG1Q9BT17 334 aaPredicted RBP17.68■□□□□ 0.42
TGFB1-202ENST00000597453 CXXC1Q9P0U4 656 aaPredicted RBP17.68■□□□□ 0.42
TGFB1-202ENST00000597453 BAZ2BQ9UIF8 2168 aaKnown RBP17.68■□□□□ 0.42
TGFB1-202ENST00000597453 PRUNE2Q8WUY3 3088 aa17.68■□□□□ 0.42
TGFB1-202ENST00000597453 A6NJR5 290 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 NKRFO15226 690 aaKnown RBP eCLIP17.67■□□□□ 0.42
TGFB1-202ENST00000597453 FOSL2P15408 326 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 CHMLP26374 656 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 PTH1RQ03431 593 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 GRIN2CQ14957 1233 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 FBXO11Q86XK2 927 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 TIFAQ96CG3 184 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 PBX4Q9BYU1 374 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 TAF6LQ9Y6J9 622 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 TANC1Q9C0D5 1861 aa17.67■□□□□ 0.42
TGFB1-202ENST00000597453 B4DLN1 442 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 OPLAHO14841 1288 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 CYP21A2P08686 494 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 CYP2C9P11712 490 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 MRPL12P52815 198 aaKnown RBP17.66■□□□□ 0.42
TGFB1-202ENST00000597453 TTLL4Q14679 1199 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 NBPF20Q3BBV1 942 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 CCDC62Q6P9F0 684 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 HERVK_113Q902F9 699 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 VWCEQ96DN2 955 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 SCLYQ96I15 445 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 MAF1Q9H063 256 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
TGFB1-202ENST00000597453 MAD2L2Q9UI95 211 aa17.66■□□□□ 0.42
TGFB1-202ENST00000597453 SPTBN5Q9NRC6 3674 aaKnown RBP17.66■□□□□ 0.42
TGFB1-202ENST00000597453 CHD9Q3L8U1 2897 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 MYH7BA7E2Y1 1941 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 KLRF2D3W0D1 207 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 PPP1R11O60927 126 aaPredicted RBP17.65■□□□□ 0.42
TGFB1-202ENST00000597453 FGBP02675 491 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 SEPT14Q6ZU15 432 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 OTOP2Q7RTS6 562 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 MCF2L2Q86YR7 1114 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 NSUN6Q8TEA1 469 aaKnown RBP17.65■□□□□ 0.42
TGFB1-202ENST00000597453 RMDN3Q96TC7 470 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 ZNF576Q9H609 170 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 SENP2Q9HC62 589 aa17.65■□□□□ 0.42
TGFB1-202ENST00000597453 MRPL11Q9Y3B7 192 aaKnown RBP17.65■□□□□ 0.42
TGFB1-202ENST00000597453 PALM3A6NDB9 673 aaPredicted RBP17.64■□□□□ 0.41
TGFB1-202ENST00000597453 CFBP00751 764 aa17.64■□□□□ 0.41
TGFB1-202ENST00000597453 EIF2AK2P19525 551 aaKnown RBP17.64■□□□□ 0.41
TGFB1-202ENST00000597453 ARHGAP1Q07960 439 aa17.64■□□□□ 0.41
TGFB1-202ENST00000597453 LY6KQ17RY6 165 aa17.64■□□□□ 0.41
TGFB1-202ENST00000597453 BRDTQ58F21 947 aaPredicted RBP17.64■□□□□ 0.41
TGFB1-202ENST00000597453 STOX1Q6ZVD7 989 aa17.64■□□□□ 0.41
TGFB1-202ENST00000597453 MTMR8Q96EF0 704 aa17.64■□□□□ 0.41
TGFB1-202ENST00000597453 AMNQ9BXJ7 453 aa17.64■□□□□ 0.41
TGFB1-202ENST00000597453 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.41
TGFB1-202ENST00000597453 TRIP12Q14669 1992 aaPredicted RBP17.64■□□□□ 0.41
TGFB1-202ENST00000597453 KPNA6O60684 536 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 SUPT20HL2P0C7V6 817 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 GHRHRQ02643 423 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 TRDNQ13061 729 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 STXBP2Q15833 593 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 ARHGEF16Q5VV41 709 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 SKAP1Q86WV1 359 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 AFG1LQ8WV93 481 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 RUFY2Q8WXA3 655 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 IWS1Q96ST2 819 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 PXMP2Q9NR77 195 aa17.63■□□□□ 0.41
TGFB1-202ENST00000597453 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
TGFB1-202ENST00000597453 TET1Q8NFU7 2136 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 E7EWF7 191 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 IFIT3O14879 490 aaKnown RBP17.62■□□□□ 0.41
TGFB1-202ENST00000597453 ZBTB5O15062 677 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 SGSM2O43147 1006 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 GH1P01241 217 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 MMP3P08254 477 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 HSD17B4P51659 736 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 GRM4Q14833 912 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 BMP2KLQ5H9B9 411 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 NFRKBQ6P4R8 1299 aa17.62■□□□□ 0.41
TGFB1-202ENST00000597453 CHST3Q7LGC8 479 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms