RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 JMJD4Q9H9V9 463 aa15.76■□□□□ 0.11
CAPNS1-213ENST00000592354 TRMT13Q9NUP7 481 aaKnown RBP15.76■□□□□ 0.11
CAPNS1-213ENST00000592354 POLR3EQ9NVU0 708 aa15.76■□□□□ 0.11
CAPNS1-213ENST00000592354 TXNP10599 105 aaKnown RBP15.75■□□□□ 0.11
CAPNS1-213ENST00000592354 FAM47CQ5HY64 1035 aa15.75■□□□□ 0.11
CAPNS1-213ENST00000592354 FBXO11Q86XK2 927 aa15.75■□□□□ 0.11
CAPNS1-213ENST00000592354 SYTL5Q8TDW5 730 aaPredicted RBP15.75■□□□□ 0.11
CAPNS1-213ENST00000592354 TAAR1Q96RJ0 339 aa15.75■□□□□ 0.11
CAPNS1-213ENST00000592354 ALDH8A1Q9H2A2 487 aaPredicted RBP15.75■□□□□ 0.11
CAPNS1-213ENST00000592354 IL23AQ9NPF7 189 aa15.75■□□□□ 0.11
CAPNS1-213ENST00000592354 GPHNQ9NQX3 736 aaPredicted RBP15.75■□□□□ 0.11
CAPNS1-213ENST00000592354 TMEM265A0A087WTH1 108 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 CYP2C9P11712 490 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 CHMP4BP1P59074 171 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 PTH1RQ03431 593 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 SEC23AQ15436 765 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 RASIP1Q5U651 963 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 TIFAQ96CG3 184 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 SCLYQ96I15 445 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 MTG1Q9BT17 334 aaPredicted RBP15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 CXXC1Q9P0U4 656 aaPredicted RBP15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 TAF6LQ9Y6J9 622 aa15.74■□□□□ 0.11
CAPNS1-213ENST00000592354 NKRFO15226 690 aaKnown RBP eCLIP15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 CYP21A2P08686 494 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 EIF2AK2P19525 551 aaKnown RBP15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 CHMLP26374 656 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 TTLL4Q14679 1199 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 GRIN2CQ14957 1233 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 SEPT14Q6ZU15 432 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 OTOP2Q7RTS6 562 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 RGS22Q8NE09 1264 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 RMDN3Q96TC7 470 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 PBX4Q9BYU1 374 aa15.73■□□□□ 0.11
CAPNS1-213ENST00000592354 B4DLN1 442 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 KLRF2D3W0D1 207 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 OPLAHO14841 1288 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 PPP1R11O60927 126 aaPredicted RBP15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 CFBP00751 764 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 MRPL12P52815 198 aaKnown RBP15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 TRDNQ13061 729 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 LY6KQ17RY6 165 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 NBPF20Q3BBV1 942 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 BRDTQ58F21 947 aaPredicted RBP15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 HOMER1Q86YM7 354 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 MCF2L2Q86YR7 1114 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 NSUN6Q8TEA1 469 aaKnown RBP15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 RUFY2Q8WXA3 655 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 HERVK_113Q902F9 699 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 SEZ6LQ9BYH1 1024 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 ZNF576Q9H609 170 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 SENP2Q9HC62 589 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 MAD2L2Q9UI95 211 aa15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 MRPL11Q9Y3B7 192 aaKnown RBP15.72■□□□□ 0.11
CAPNS1-213ENST00000592354 MYH7BA7E2Y1 1941 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 A6NJR5 290 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 FGBP02675 491 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 ARHGEF16Q5VV41 709 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 CCDC62Q6P9F0 684 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 STOX1Q6ZVD7 989 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 CHST3Q7LGC8 479 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 AFG1LQ8WV93 481 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 AMNQ9BXJ7 453 aa15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 MTIF3Q9H2K0 278 aaKnown RBP15.71■□□□□ 0.11
CAPNS1-213ENST00000592354 IFIT3O14879 490 aaKnown RBP15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 MMP3P08254 477 aa15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 SUPT20HL2P0C7V6 817 aa15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 ARHGAP1Q07960 439 aa15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 STXBP2Q15833 593 aa15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 SLC35G1Q2M3R5 365 aa15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 DEFB128Q7Z7B8 93 aa15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 RALYLQ86SE5 291 aaKnown RBP15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 PXMP2Q9NR77 195 aa15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
CAPNS1-213ENST00000592354 PTPRSQ13332 1948 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 ERICH2A1L162 156 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 PALM3A6NDB9 673 aaPredicted RBP15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 ZBBXA8MT70 800 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 E7EWF7 191 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 ZBTB5O15062 677 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 SORBS3O60504 671 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 GH1P01241 217 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 HOXA13P31271 388 aaPredicted RBP15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 HSD17B4P51659 736 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 GRM4Q14833 912 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 VWCEQ96DN2 955 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 IWS1Q96ST2 819 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 COL25A1Q9BXS0 654 aaPredicted RBP15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 NKX2-4Q9H2Z4 354 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 PRDM12Q9H4Q4 367 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 YBX2Q9Y2T7 364 aaKnown RBP15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
CAPNS1-213ENST00000592354 SGSM2O43147 1006 aa15.68■□□□□ 0.1
CAPNS1-213ENST00000592354 KPNA6O60684 536 aa15.68■□□□□ 0.1
CAPNS1-213ENST00000592354 NR3C2P08235 984 aa15.68■□□□□ 0.1
CAPNS1-213ENST00000592354 RABGGTBP53611 331 aa15.68■□□□□ 0.1
CAPNS1-213ENST00000592354 WTAPQ15007 396 aa15.68■□□□□ 0.1
CAPNS1-213ENST00000592354 RAB30Q15771 203 aa15.68■□□□□ 0.1
CAPNS1-213ENST00000592354 NFRKBQ6P4R8 1299 aa15.68■□□□□ 0.1
CAPNS1-213ENST00000592354 RPUSD2Q8IZ73 545 aaKnown RBP15.68■□□□□ 0.1
CAPNS1-213ENST00000592354 USP38Q8NB14 1042 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms