RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SLC39A5	Q6ZMH5	540 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	RNF180	Q86T96	592 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	C7orf61	Q8IZ16	206 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	IL31RA	Q8NI17	732 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	TSEN34	Q9BSV6	310 aa	Known RBP	20.03	■□□□□ 0.8
MBD1-221	ENST00000589867		A0A1W2PQ45	241 aa	Predicted RBP	20.02	■□□□□ 0.8
MBD1-221	ENST00000589867		A0A1W2PQY0	241 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	ADD1	P35611	737 aa	Known RBP	20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	BEX3	Q00994	111 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	PDE4D	Q08499	809 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	DUSP28	Q4G0W2	176 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	TYW1B	Q6NUM6	668 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	RUFY3	Q7L099	469 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	SAMD3	Q8N6K7	520 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	NSUN6	Q8TEA1	469 aa	Known RBP	20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	TM6SF1	Q9BZW5	370 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	PRO3102	Q9H379	93 aa		20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	MAP3K20	Q9NYL2	800 aa	Known RBP	20.02	■□□□□ 0.8
MBD1-221	ENST00000589867	GOLGA8A	A7E2F4	631 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	GOLGA8B	A8MQT2	603 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	MEIS2	O14770	477 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	RGS20	O76081	388 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	C6orf222	P0C671	652 aa	Predicted RBP	20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	EIF2AK2	P19525	551 aa	Known RBP	20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	PSMA5	P28066	241 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	ACLY	P53396	1101 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	CCDC62	Q6P9F0	684 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	SYNE3	Q6ZMZ3	975 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	TLK2	Q86UE8	772 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	COPS5	Q92905	334 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	IL17RA	Q96F46	866 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	IWS1	Q96ST2	819 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	PDCD2L	Q9BRP1	358 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	WDR11	Q9BZH6	1224 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	UPF3B	Q9BZI7	483 aa	Known RBP	20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	RBM28	Q9NW13	759 aa	Known RBP	20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	FRMPD4	Q14CM0	1322 aa		20.01	■□□□□ 0.79
MBD1-221	ENST00000589867	GCOM1	H8Y6P7	765 aa	Predicted RBP	20	■□□□□ 0.79
MBD1-221	ENST00000589867	DYNC1LI2	O43237	492 aa	Predicted RBP	20	■□□□□ 0.79
MBD1-221	ENST00000589867	NR3C2	P08235	984 aa		20	■□□□□ 0.79
MBD1-221	ENST00000589867	POLR2M	P0CAP2	368 aa		20	■□□□□ 0.79
MBD1-221	ENST00000589867	RTP1	P59025	263 aa		20	■□□□□ 0.79
MBD1-221	ENST00000589867	C1orf53	Q5VUE5	145 aa		20	■□□□□ 0.79
MBD1-221	ENST00000589867	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	20	■□□□□ 0.79
MBD1-221	ENST00000589867		Q9Y3F1	56 aa		20	■□□□□ 0.79
MBD1-221	ENST00000589867	NR2E3	Q9Y5X4	410 aa		20	■□□□□ 0.79
MBD1-221	ENST00000589867	ASGR1	P07306	291 aa		19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	TRAF1	Q13077	416 aa		19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	NTRK3	Q16288	839 aa		19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	GNAS	Q5JWF2	1037 aa		19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	ARHGEF16	Q5VV41	709 aa		19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	WWC2	Q6AWC2	1192 aa		19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	USP17L6P	Q6QN14	398 aa		19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	VSIG10L	Q86VR7	867 aa		19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	19.99	■□□□□ 0.79
MBD1-221	ENST00000589867	MOXD2P	A6NHM9	499 aa		19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	PIK3CD	O00329	1044 aa		19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	SYN1	P17600	705 aa		19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	PDIA3	P30101	505 aa	Known RBP	19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	PGM5	Q15124	567 aa		19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	FSCN1	Q16658	493 aa	Known RBP	19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	TRIM60	Q495X7	471 aa		19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	NOL8	Q76FK4	1167 aa	Known RBP	19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	FCHSD1	Q86WN1	690 aa		19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	ZFP91	Q96JP5	570 aa	Predicted RBP	19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	LARP6	Q9BRS8	491 aa	Known RBP	19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	SEC63	Q9UGP8	760 aa	Known RBP	19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	COLQ	Q9Y215	455 aa	Predicted RBP	19.98	■□□□□ 0.79
MBD1-221	ENST00000589867		V9GY48	417 aa	Predicted RBP	19.98	■□□□□ 0.79
MBD1-221	ENST00000589867	METAP2	P50579	478 aa	Known RBP eCLIP	19.97	■□□□□ 0.79
MBD1-221	ENST00000589867	STXBP2	Q15833	593 aa		19.97	■□□□□ 0.79
MBD1-221	ENST00000589867	C8orf34	Q49A92	452 aa		19.97	■□□□□ 0.79
MBD1-221	ENST00000589867	SCFD2	Q8WU76	684 aa		19.97	■□□□□ 0.79
MBD1-221	ENST00000589867	GRIN2D	O15399	1336 aa		19.97	■□□□□ 0.79
MBD1-221	ENST00000589867	LAMA3	Q16787	3333 aa		19.97	■□□□□ 0.79
MBD1-221	ENST00000589867	EIF3J	O75822	258 aa	Known RBP	19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	CDK7	P50613	346 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	MRPS9	P82933	396 aa	Known RBP	19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	FGD1	P98174	961 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	PKN1	Q16512	942 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	CXCL17	Q6UXB2	119 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	SEPT14	Q6ZU15	432 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	PCSK9	Q8NBP7	692 aa	Known RBP	19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	SPC25	Q9HBM1	224 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	NCOA5	Q9HCD5	579 aa	Known RBP	19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	NAP1L2	Q9ULW6	460 aa	Predicted RBP	19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	ATP11B	Q9Y2G3	1177 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	CYP46A1	Q9Y6A2	500 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	LTBP2	Q14767	1821 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	MYH7B	A7E2Y1	1941 aa		19.96	■□□□□ 0.79
MBD1-221	ENST00000589867	SCN10A	Q9Y5Y9	1956 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867		B4DLN1	442 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	STXBP3	O00186	592 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	ADAMTS3	O15072	1205 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	TXN	P10599	105 aa	Known RBP	19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	MRPL12	P52815	198 aa	Known RBP	19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	ANAPC15	P60006	121 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	TLE2	Q04725	743 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	PPP2R5B	Q15173	497 aa		19.95	■□□□□ 0.78
MBD1-221	ENST00000589867	UBE2S	Q16763	222 aa		19.95	■□□□□ 0.78

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