RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PITPNM1O00562 1244 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 LPXNO60711 386 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 HSPD1P10809 573 aaKnown RBP14□□□□□ -0.17
BRCA1-225ENST00000586385 HAND2P61296 217 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 PPP2R5BQ15173 497 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 TCTN1Q2MV58 587 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 FAM47CQ5HY64 1035 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 RRP12Q5JTH9 1297 aaKnown RBP14□□□□□ -0.17
BRCA1-225ENST00000586385 HERC6Q8IVU3 1022 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 SCFD2Q8WU76 684 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 TBC1D5Q92609 795 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
BRCA1-225ENST00000586385 KAT2BQ92831 832 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 EVI5LQ96CN4 794 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 XIRP2A4UGR9 3374 aa14□□□□□ -0.17
BRCA1-225ENST00000586385 TRANK1O15050 2925 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
BRCA1-225ENST00000586385 RFC2P35250 354 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 PDE1AP54750 535 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 PDE4DQ08499 809 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 TMCO2Q7Z6W1 182 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-225ENST00000586385 DNERQ8NFT8 737 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 PHOSPHO2Q8TCD6 241 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 SLC9A7Q96T83 725 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 TOMM22Q9NS69 142 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 TET1Q8NFU7 2136 aa13.99□□□□□ -0.17
BRCA1-225ENST00000586385 ZMYM6O95789 1325 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 LCHNA4D1U4 455 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 GOLGA8HP0CJ92 632 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 TXNP10599 105 aaKnown RBP13.98□□□□□ -0.17
BRCA1-225ENST00000586385 PTPN11Q06124 597 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-225ENST00000586385 ARHGAP1Q07960 439 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 NMIQ13287 307 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-225ENST00000586385 GRB10Q13322 594 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 MCMDC2Q4G0Z9 681 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-225ENST00000586385 AFG1LQ8WV93 481 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 ARNTL2Q8WYA1 636 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 UBA5Q9GZZ9 404 aa13.98□□□□□ -0.17
BRCA1-225ENST00000586385 GPHNQ9NQX3 736 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-225ENST00000586385 NEDD4P46934 1319 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 TCF20Q9UGU0 1960 aaKnown RBP13.97□□□□□ -0.17
BRCA1-225ENST00000586385 TLL1O43897 1013 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 KPNA6O60684 536 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 MMP3P08254 477 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 ACTN1P12814 892 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 TRAF7Q6Q0C0 670 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 SYTL5Q8TDW5 730 aaPredicted RBP13.97□□□□□ -0.17
BRCA1-225ENST00000586385 TTC14Q96N46 770 aa13.97□□□□□ -0.17
BRCA1-225ENST00000586385 TANC1Q9C0D5 1861 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 NBNO60934 754 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 WDR5P61964 334 aaKnown RBP13.96□□□□□ -0.17
BRCA1-225ENST00000586385 DEFB103AP81534 67 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 RBL2Q08999 1139 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 SKIV2LQ15477 1246 aaKnown RBP13.96□□□□□ -0.17
BRCA1-225ENST00000586385 PTGISQ16647 500 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 LY6KQ17RY6 165 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 USH1GQ495M9 461 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 BRDTQ58F21 947 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-225ENST00000586385 SESTD1Q86VW0 696 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 RETREG2Q8NC44 543 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 IL27Q8NEV9 243 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 KHSRPQ92945 711 aaKnown RBP eCLIP13.96□□□□□ -0.174e-9■■■□□ 15.2
BRCA1-225ENST00000586385 WNT8BQ93098 351 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 TAAR1Q96RJ0 339 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 FTOQ9C0B1 505 aaKnown RBP eCLIP13.96□□□□□ -0.17
BRCA1-225ENST00000586385 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
BRCA1-225ENST00000586385 EPHX3Q9H6B9 360 aa13.96□□□□□ -0.17
BRCA1-225ENST00000586385 CCDC171Q6TFL3 1326 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 RAD50Q92878 1312 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 GTPBP6O43824 516 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-225ENST00000586385 BAIAP3O94812 1187 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 CXCL10P02778 98 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 PLA2G5P39877 138 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 BFSP2Q13515 415 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 HIC1Q14526 733 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 TRIM71Q2Q1W2 868 aaKnown RBP13.95□□□□□ -0.18
BRCA1-225ENST00000586385 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 PTPRSQ13332 1948 aa13.95□□□□□ -0.18
BRCA1-225ENST00000586385 OPLAHO14841 1288 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 CHMP4BP1P59074 171 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 MBTPS1Q14703 1052 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 CDC37Q16543 378 aaPredicted RBP13.94□□□□□ -0.18
BRCA1-225ENST00000586385 AAK1Q2M2I8 961 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 GPATCH4Q5T3I0 446 aaKnown RBP13.94□□□□□ -0.18
BRCA1-225ENST00000586385 MFSD6Q6ZSS7 791 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 SEPT14Q6ZU15 432 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 C11orf16Q9NQ32 467 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 HDAC6Q9UBN7 1215 aa13.94□□□□□ -0.18
BRCA1-225ENST00000586385 GH1P01241 217 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 PCP11498 1178 aaKnown RBP13.93□□□□□ -0.18
BRCA1-225ENST00000586385 SELPP16109 830 aa13.93□□□□□ -0.18
BRCA1-225ENST00000586385 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-225ENST00000586385 LRRC8DQ7L1W4 858 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms