RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 PRR12Q9ULL5 1215 aa10.22□□□□□ -0.77
CRLF3-205ENST00000583805 CCDC171Q6TFL3 1326 aa10.22□□□□□ -0.77
CRLF3-205ENST00000583805 EYSQ5T1H1 3165 aa10.22□□□□□ -0.77
CRLF3-205ENST00000583805 ZEB2O60315 1214 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 ASGR1P07306 291 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 HSPD1P10809 573 aaKnown RBP10.21□□□□□ -0.77
CRLF3-205ENST00000583805 TOP1P11387 765 aaKnown RBP10.21□□□□□ -0.77
CRLF3-205ENST00000583805 ALAS1P13196 640 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 FAAP100Q0VG06 881 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 SHHQ15465 462 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 CCDC96Q2M329 555 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 GNASQ5JWF2 1037 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 VPS53Q5VIR6 699 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 BTNL9Q6UXG8 535 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 KCTD1Q719H9 257 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 SH3RF1Q7Z6J0 888 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 SMC5Q8IY18 1101 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 LENG1Q96BZ8 264 aaPredicted RBP10.21□□□□□ -0.77
CRLF3-205ENST00000583805 RNPC3Q96LT9 517 aaKnown RBP10.21□□□□□ -0.77
CRLF3-205ENST00000583805 AGBL1Q96MI9 1066 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 TTC14Q96N46 770 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 MPHOSPH6Q99547 160 aaKnown RBP10.21□□□□□ -0.77
CRLF3-205ENST00000583805 KATNBL1Q9H079 304 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 VTA1Q9NP79 307 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 TOMM22Q9NS69 142 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
CRLF3-205ENST00000583805 CCPG1Q9ULG6 757 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 Q9Y3F1 56 aa10.21□□□□□ -0.77
CRLF3-205ENST00000583805 CDH23Q9H251 3354 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 A0A0C4DFX4 3053 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 A0A0D9SFI3 127 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 POM121CA8CG34 1229 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 TRIM6-TRIM34B2RNG4 842 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 ARVCFO00192 962 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 HIP1O00291 1037 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 TIMP1P01033 207 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 FGAP02671 866 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 CNTN2Q02246 1040 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 TNFAIP2Q03169 654 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 PPIGQ13427 754 aaKnown RBP eCLIP10.2□□□□□ -0.78
CRLF3-205ENST00000583805 CCDC178Q5BJE1 867 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 C9orf50Q5SZB4 431 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 SYDE2Q5VT97 1194 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 MFSD5Q6N075 450 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 TLK2Q86UE8 772 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 MORC4Q8TE76 937 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 MAF1Q9H063 256 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 RWDD1Q9H446 243 aaPredicted RBP10.2□□□□□ -0.78
CRLF3-205ENST00000583805 OSBPL3Q9H4L5 887 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 CYP39A1Q9NYL5 469 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 TBX21Q9UL17 535 aa10.2□□□□□ -0.78
CRLF3-205ENST00000583805 PTPRSQ13332 1948 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 MYADML2A6NDP7 307 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 B4DLN1 442 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 ADCY6O43306 1168 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 NMT2O60551 498 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 CDK7P50613 346 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 MRPL12P52815 198 aaKnown RBP10.19□□□□□ -0.78
CRLF3-205ENST00000583805 NMIQ13287 307 aaPredicted RBP10.19□□□□□ -0.78
CRLF3-205ENST00000583805 RRP12Q5JTH9 1297 aaKnown RBP10.19□□□□□ -0.78
CRLF3-205ENST00000583805 AKNAD1Q5T1N1 836 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 GPATCH4Q5T3I0 446 aaKnown RBP10.19□□□□□ -0.78
CRLF3-205ENST00000583805 IQSEC1Q6DN90 963 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 MFSD6Q6ZSS7 791 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 ESR2Q92731 530 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 VTI1AQ96AJ9 217 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 FAM227BQ96M60 508 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 GUCD1Q96NT3 240 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 TMEM47Q9BQJ4 181 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 LNPKQ9C0E8 428 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 AP5M1Q9H0R1 490 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 GNEQ9Y223 722 aaKnown RBP10.19□□□□□ -0.78
CRLF3-205ENST00000583805 USTQ9Y2C2 406 aa10.19□□□□□ -0.78
CRLF3-205ENST00000583805 PRUNE2Q8WUY3 3088 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 DLL1O00548 723 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 SNHG28P0DPA3 235 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 PDHBP11177 359 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 COL9A1P20849 921 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 ITGB8P26012 769 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 FSCN1Q16658 493 aaKnown RBP10.18□□□□□ -0.78
CRLF3-205ENST00000583805 PSRC1Q6PGN9 363 aaPredicted RBP10.18□□□□□ -0.78
CRLF3-205ENST00000583805 NSMFQ6X4W1 530 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 NOL8Q76FK4 1167 aaKnown RBP10.18□□□□□ -0.78
CRLF3-205ENST00000583805 ZNF589Q86UQ0 364 aaPredicted RBP10.18□□□□□ -0.78
CRLF3-205ENST00000583805 IQCA1Q86XH1 822 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 FAM126BQ8IXS8 530 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 TMEM199Q8N511 208 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 RILPL2Q969X0 211 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 MTIF3Q9H2K0 278 aaKnown RBP10.18□□□□□ -0.78
CRLF3-205ENST00000583805 DOCK5Q9H7D0 1870 aa10.18□□□□□ -0.78
CRLF3-205ENST00000583805 BAZ2BQ9UIF8 2168 aaKnown RBP10.18□□□□□ -0.78
CRLF3-205ENST00000583805 ASTN1O14525 1302 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 RAD50Q92878 1312 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.17□□□□□ -0.78
CRLF3-205ENST00000583805 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.17□□□□□ -0.78
CRLF3-205ENST00000583805 ZNF213O14771 459 aa10.17□□□□□ -0.78
CRLF3-205ENST00000583805 NKRFO15226 690 aaKnown RBP eCLIP10.17□□□□□ -0.78
CRLF3-205ENST00000583805 CTAGE5O15320 804 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms