RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	RABGGTB	P53611	331 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	RRP1	P56182	461 aa	Known RBP	11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	HAND2	P61296	217 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	RPS6	P62753	249 aa	Known RBP	11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	PDE4D	Q08499	809 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	ZNF543	Q08ER8	600 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	NMI	Q13287	307 aa	Predicted RBP	11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	TICAM2	Q86XR7	235 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	PLCD3	Q8N3E9	789 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	WDR19	Q8NEZ3	1342 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	TTC14	Q96N46	770 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	CRBN	Q96SW2	442 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	MTG1	Q9BT17	334 aa	Predicted RBP	11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	GPHN	Q9NQX3	736 aa	Predicted RBP	11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	THEG	Q9P2T0	379 aa		11.22	□□□□□ -0.61
DDX42-215	ENST00000582985	GBF1	Q92538	1859 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	MUC3A	Q02505	3323 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	CCDC171	Q6TFL3	1326 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	RAD50	Q92878	1312 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	ZBBX	A8MT70	800 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	NKRF	O15226	690 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	PFKM	P08237	780 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	PC	P11498	1178 aa	Known RBP	11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	MYOG	P15173	224 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	ATP2A2	P16615	1042 aa	Known RBP	11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	EDNRB	P24530	442 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	HDAC1	Q13547	482 aa	Predicted RBP	11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	TTLL4	Q14679	1199 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	PPP2R5B	Q15173	497 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	CCDC85B	Q15834	202 aa	Predicted RBP	11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	NBPF20	Q3BBV1	942 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	BRDT	Q58F21	947 aa	Predicted RBP	11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	PPP2R2D	Q66LE6	453 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	MFSD6	Q6ZSS7	791 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	TBC1D10C	Q8IV04	446 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	DNER	Q8NFT8	737 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	SCFD2	Q8WU76	684 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	MPHOSPH6	Q99547	160 aa	Known RBP	11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	PCDHA11	Q9Y5I1	949 aa		11.21	□□□□□ -0.61
DDX42-215	ENST00000582985	MYO9B	Q13459	2157 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985		A6NJR5	290 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	TRIM6-TRIM34	B2RNG4	842 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	TNFRSF10A	O00220	468 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	KPNA6	O60684	536 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	FAM47C	Q5HY64	1035 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	NFRKB	Q6P4R8	1299 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	DEFB128	Q7Z7B8	93 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	PPP1R13L	Q8WUF5	828 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	COPS5	Q92905	334 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	ASB2	Q96Q27	587 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	RNF41	Q9H4P4	317 aa	Predicted RBP	11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	CHD7	Q9P2D1	2997 aa		11.2	□□□□□ -0.62
DDX42-215	ENST00000582985	SCN10A	Q9Y5Y9	1956 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	NEDD4	P46934	1319 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985		B4DLN1	442 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	GOLGA8H	P0CJ92	632 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	TXN	P10599	105 aa	Known RBP	11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	RFC2	P35250	354 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	MRPL12	P52815	198 aa	Known RBP	11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	MRPS5	P82675	430 aa	Known RBP	11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	USH1G	Q495M9	461 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	GPATCH4	Q5T3I0	446 aa	Known RBP	11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	MAMSTR	Q6ZN01	415 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	RGS22	Q8NE09	1264 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	ESR2	Q92731	530 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	RILPL2	Q969X0	211 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	ZKSCAN3	Q9BRR0	538 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	LNPK	Q9C0E8	428 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	UBA5	Q9GZZ9	404 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	CPVL	Q9H3G5	476 aa		11.19	□□□□□ -0.62
DDX42-215	ENST00000582985	ARIH2	O95376	493 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	IQCF3	P0C7M6	154 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	ACTN1	P12814	892 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	SDS	P20132	328 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	MFAP1	P55081	439 aa	Known RBP	11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	PTPN11	Q06124	597 aa	Predicted RBP	11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	TMEM67	Q5HYA8	995 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	DGKH	Q86XP1	1220 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	RETREG2	Q8NC44	543 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	ADAMTS19	Q8TE59	1207 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	SCN5A	Q14524	2016 aa		11.18	□□□□□ -0.62
DDX42-215	ENST00000582985	ZNF213	O14771	459 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	CA3	P07451	260 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	BFSP2	Q13515	415 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	CDC37	Q16543	378 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	CCDC62	Q6P9F0	684 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	MICALL1	Q8N3F8	863 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	PNMA1	Q8ND90	353 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	TBC1D5	Q92609	795 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	SLC9A7	Q96T83	725 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	MAF1	Q9H063	256 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	NOD1	Q9Y239	953 aa		11.17	□□□□□ -0.62
DDX42-215	ENST00000582985	ABCB11	O95342	1321 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	KDM4A	O75164	1064 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	MMP3	P08254	477 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	NT5C2	P49902	561 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	CHMP4BP1	P59074	171 aa		11.16	□□□□□ -0.62
DDX42-215	ENST00000582985	LY6K	Q17RY6	165 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms