RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 RASA1P20936 1047 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 SLC1A4P43007 532 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 ALDH5A1P51649 535 aaPredicted RBP7.01□□□□□ -1.29
SMG6-219ENST00000575663 GPM6BQ13491 265 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 TMEM63BQ5T3F8 832 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 SLFN13Q68D06 897 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 ZSCAN25Q6NSZ9 544 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 CTR9Q6PD62 1173 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 SESTD1Q86VW0 696 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 FBXO11Q86XK2 927 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 ZNF444Q8N0Y2 327 aaPredicted RBP7.01□□□□□ -1.29
SMG6-219ENST00000575663 SP7Q8TDD2 431 aaPredicted RBP7.01□□□□□ -1.29
SMG6-219ENST00000575663 SCFD2Q8WU76 684 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 FRAT1Q92837 279 aaPredicted RBP7.01□□□□□ -1.29
SMG6-219ENST00000575663 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMG6-219ENST00000575663 KATNAL1Q9BW62 490 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 CCPG1Q9ULG6 757 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 DDX49Q9Y6V7 483 aaKnown RBP7.01□□□□□ -1.29
SMG6-219ENST00000575663 RBM47A0AV96 593 aaKnown RBP7□□□□□ -1.29
SMG6-219ENST00000575663 A6NJR5 290 aa7□□□□□ -1.29
SMG6-219ENST00000575663 B4DLN1 442 aa7□□□□□ -1.29
SMG6-219ENST00000575663 MBTPS2O43462 519 aa7□□□□□ -1.29
SMG6-219ENST00000575663 NBNO60934 754 aa7□□□□□ -1.29
SMG6-219ENST00000575663 KDM4AO75164 1064 aa7□□□□□ -1.29
SMG6-219ENST00000575663 LGR5O75473 907 aa7□□□□□ -1.29
SMG6-219ENST00000575663 IFIT2P09913 472 aaKnown RBP7□□□□□ -1.29
SMG6-219ENST00000575663 CKBP12277 381 aa7□□□□□ -1.29
SMG6-219ENST00000575663 ID4P47928 161 aa7□□□□□ -1.29
SMG6-219ENST00000575663 MRPL12P52815 198 aaKnown RBP7□□□□□ -1.29
SMG6-219ENST00000575663 NUBP1P53384 320 aa7□□□□□ -1.29
SMG6-219ENST00000575663 HTRA4P83105 476 aaPredicted RBP7□□□□□ -1.29
SMG6-219ENST00000575663 PDE4BQ07343 736 aa7□□□□□ -1.29
SMG6-219ENST00000575663 PDE4DQ08499 809 aa7□□□□□ -1.29
SMG6-219ENST00000575663 UBE3CQ15386 1083 aa7□□□□□ -1.29
SMG6-219ENST00000575663 CLUL1Q15846 466 aa7□□□□□ -1.29
SMG6-219ENST00000575663 HSP90AB4PQ58FF6 505 aa7□□□□□ -1.29
SMG6-219ENST00000575663 PPP4R3BQ5MIZ7 849 aa7□□□□□ -1.29
SMG6-219ENST00000575663 STK11IPQ8N1F8 1099 aa7□□□□□ -1.29
SMG6-219ENST00000575663 CLASRPQ8N2M8 674 aaKnown RBP7□□□□□ -1.29
SMG6-219ENST00000575663 PPP1R13LQ8WUF5 828 aa7□□□□□ -1.29
SMG6-219ENST00000575663 STAG1Q8WVM7 1258 aa7□□□□□ -1.29
SMG6-219ENST00000575663 PPP2R3CQ969Q6 453 aa7□□□□□ -1.29
SMG6-219ENST00000575663 MKL1Q969V6 931 aa7□□□□□ -1.29
SMG6-219ENST00000575663 CLUAP1Q96AJ1 413 aa7□□□□□ -1.29
SMG6-219ENST00000575663 CEP95Q96GE4 821 aa7□□□□□ -1.29
SMG6-219ENST00000575663 GMCL1Q96IK5 515 aa7□□□□□ -1.29
SMG6-219ENST00000575663 PAG1Q9NWQ8 432 aa7□□□□□ -1.29
SMG6-219ENST00000575663 MTMR4Q9NYA4 1195 aa7□□□□□ -1.29
SMG6-219ENST00000575663 RWDD3Q9Y3V2 267 aa7□□□□□ -1.29
SMG6-219ENST00000575663 MYO15AQ9UKN7 3530 aa7□□□□□ -1.29
SMG6-219ENST00000575663 MYO5AQ9Y4I1 1855 aaKnown RBP7□□□□□ -1.29
SMG6-219ENST00000575663 C5orf42Q9H799 3197 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 CFAP54Q96N23 3096 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 IGKV6D-41A0A0C4DH26 115 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 PTPDC1A2A3K4 754 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 PROB1E7EW31 1015 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 ICAM1P05362 532 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 TSPY3P0CV98 308 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 TSPY8P0CW00 308 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 TXNP10599 105 aaKnown RBP6.99□□□□□ -1.29
SMG6-219ENST00000575663 CTNNB1P35222 781 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 NDUFV1P49821 464 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 ZXDAP98168 799 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 SIGLEC14Q08ET2 396 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 PTK7Q13308 1070 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 GPNMBQ14956 572 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 SBK1Q52WX2 424 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 MUM1L1Q5H9M0 696 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
SMG6-219ENST00000575663 TMEM192Q8IY95 271 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 TMEM57Q8N5G2 664 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 C7orf31Q8N865 590 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 DHX38Q92620 1227 aaKnown RBP6.99□□□□□ -1.29
SMG6-219ENST00000575663 FSD1Q9BTV5 496 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 C11orf84Q9BUA3 381 aaPredicted RBP6.99□□□□□ -1.29
SMG6-219ENST00000575663 LMAN2LQ9H0V9 348 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 C1orf115Q9H7X2 142 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 GTF2IRD1Q9UHL9 959 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 CD207Q9UJ71 328 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 EXOC6BQ9Y2D4 811 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 CACNA1AO00555 2505 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 COL4A6Q14031 1691 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 MYH8P13535 1937 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 SIP14410 1827 aa6.99□□□□□ -1.29
SMG6-219ENST00000575663 ZNF318Q5VUA4 2279 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 SCN5AQ14524 2016 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 PLIN4Q96Q06 1357 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 MINDY4BA8MYZ0 360 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 PLA2G6O60733 806 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 TBX10O75333 385 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 MMP3P08254 477 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 CASTP20810 708 aaKnown RBP6.98□□□□□ -1.29
SMG6-219ENST00000575663 CALML3P27482 149 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 LTBRP36941 435 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 TDO2P48775 406 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 BAATQ14032 418 aaPredicted RBP6.98□□□□□ -1.29
SMG6-219ENST00000575663 CTC1Q2NKJ3 1217 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 DIEXFQ68CQ4 756 aaKnown RBP6.98□□□□□ -1.29
SMG6-219ENST00000575663 MCTP2Q6DN12 878 aa6.98□□□□□ -1.29
SMG6-219ENST00000575663 GIMAP6Q6P9H5 292 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms