RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 LETMD1Q6P1Q0 360 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 OGFOD3Q6PK18 319 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 TAB3Q8N5C8 712 aaPredicted RBP6.3□□□□□ -1.4
PRPF8-211ENST00000574728 GATA6Q92908 595 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 CFAP53Q96M91 514 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 DUSP23Q9BVJ7 150 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 SCN11AQ9UI33 1791 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 C4BP0C0L5 1744 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 QSER1Q2KHR3 1735 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 C5P01031 1676 aa6.3□□□□□ -1.4
PRPF8-211ENST00000574728 TAF1LQ8IZX4 1826 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 RGS13O14921 159 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 KCNQ3O43525 872 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 SLITRK5O94991 958 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 F13BP05160 661 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 GUCY2CP25092 1073 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 GBP1P32455 592 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
PRPF8-211ENST00000574728 CCNFP41002 786 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 ETV3P41162 512 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 CHMP4BP1P59074 171 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 TJP1Q07157 1748 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 SLC39A6Q13433 755 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 TNNI3KQ59H18 835 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 C1orf141Q5JVX7 400 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 DUSP27Q5VZP5 1158 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 INTS5Q6P9B9 1019 aaKnown RBP6.29□□□□□ -1.4
PRPF8-211ENST00000574728 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
PRPF8-211ENST00000574728 ARMC5Q96C12 935 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 KIF2CQ99661 725 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 METTL22Q9BUU2 404 aaPredicted RBP6.29□□□□□ -1.4
PRPF8-211ENST00000574728 OSBPL1AQ9BXW6 950 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 MTFR1LQ9H019 292 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 ZNF408Q9H9D4 720 aa6.29□□□□□ -1.4
PRPF8-211ENST00000574728 PPP1R1BQ9UD71 204 aaPredicted RBP6.29□□□□□ -1.4
PRPF8-211ENST00000574728 SIPA1L3O60292 1781 aaPredicted RBP6.29□□□□□ -1.4
PRPF8-211ENST00000574728 CNTNAP4Q9C0A0 1308 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 GNAT3A8MTJ3 354 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 WDR64B1ANS9 1081 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 LEFTY1O75610 366 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 FURINP09958 794 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 ETFBP38117 255 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 CPSF6Q16630 551 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRPF8-211ENST00000574728 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 SHKBP1Q8TBC3 707 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 BAHD1Q8TBE0 780 aaPredicted RBP6.28□□□□□ -1.4
PRPF8-211ENST00000574728 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRPF8-211ENST00000574728 SPON1Q9HCB6 807 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 TFCP2L1Q9NZI6 479 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 PRKAG3Q9UGI9 489 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 TPX2Q9ULW0 747 aaKnown RBP6.28□□□□□ -1.4
PRPF8-211ENST00000574728 CEP131Q9UPN4 1083 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 NUDCQ9Y266 331 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 SLC12A7Q9Y666 1083 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 KAT6BQ8WYB5 2073 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 HEG1Q9ULI3 1381 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 UBR3Q6ZT12 1888 aa6.28□□□□□ -1.4
PRPF8-211ENST00000574728 COL5A3P25940 1745 aaPredicted RBP6.28□□□□□ -1.4
PRPF8-211ENST00000574728 MYH14Q7Z406 1995 aaKnown RBP6.27□□□□□ -1.4
PRPF8-211ENST00000574728 UBR2Q8IWV8 1755 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 FAM170BA6NMN3 283 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 HTATSF1O43719 755 aaKnown RBP6.27□□□□□ -1.41
PRPF8-211ENST00000574728 CYP19A1P11511 503 aaPredicted RBP6.27□□□□□ -1.41
PRPF8-211ENST00000574728 CYP7A1P22680 504 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 POLR2BP30876 1174 aaKnown RBP6.27□□□□□ -1.41
PRPF8-211ENST00000574728 DCTN1Q14203 1278 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 PPP2R5EQ16537 467 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 ZNF765Q7L2R6 523 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 MCM10Q7L590 875 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 CDH24Q86UP0 819 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 DNAJC10Q8IXB1 793 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 FAM169BQ8N8A8 192 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 ZNF496Q96IT1 587 aaPredicted RBP6.27□□□□□ -1.41
PRPF8-211ENST00000574728 COX4I2Q96KJ9 171 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 SLC9A7Q96T83 725 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 PRDM5Q9NQX1 630 aaPredicted RBP6.27□□□□□ -1.41
PRPF8-211ENST00000574728 GTF2IRD1Q9UHL9 959 aa6.27□□□□□ -1.41
PRPF8-211ENST00000574728 R3HCC1Q9Y3T6 440 aaKnown RBP6.27□□□□□ -1.41
PRPF8-211ENST00000574728 SMAD7O15105 426 aaKnown RBP6.26□□□□□ -1.41
PRPF8-211ENST00000574728 RPS6KA4O75676 772 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 UBOX5O94941 541 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 EOMESO95936 686 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 ACRP10323 421 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 CRKLP46109 303 aaKnown RBP6.26□□□□□ -1.41
PRPF8-211ENST00000574728 CASP7P55210 303 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 NFE2L2Q16236 605 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 ZNF790Q6PG37 636 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 UNC5AQ6ZN44 842 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 TTC6Q86TZ1 520 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 CKAP2LQ8IYA6 745 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 SHISA5Q8N114 240 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 DNAJB8Q8NHS0 232 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 RIN3Q8TB24 985 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 PPP1R13LQ8WUF5 828 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 UBXN4Q92575 508 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 DHX38Q92620 1227 aaKnown RBP6.26□□□□□ -1.41
PRPF8-211ENST00000574728 DHRS1Q96LJ7 313 aa6.26□□□□□ -1.41
PRPF8-211ENST00000574728 THUMPD2Q9BTF0 503 aaKnown RBP6.26□□□□□ -1.41
PRPF8-211ENST00000574728 SEMA6BQ9H3T3 888 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms