RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 GOLGA6L1Q8N7Z2 621 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 DDX1Q92499 740 aaKnown RBP8.82□□□□□ -1
CNOT1-222ENST00000570139 DDX17Q92841 729 aaKnown RBP8.82□□□□□ -1
CNOT1-222ENST00000570139 KLHDC7BQ96G42 594 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 PHACTR3Q96KR7 559 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 PRDM11Q9NQV5 511 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 FAM86C1Q9NVL1 165 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 SUSD2Q9UGT4 822 aa8.82□□□□□ -1
CNOT1-222ENST00000570139 RRP7AQ9Y3A4 280 aaKnown RBP8.82□□□□□ -1
CNOT1-222ENST00000570139 COL5A2P05997 1499 aaPredicted RBP8.82□□□□□ -1
CNOT1-222ENST00000570139 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 EFCAB14O75071 495 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 RASGRP1O95267 797 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 ITGAVP06756 1048 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 PABPC1P11940 636 aaKnown RBP8.81□□□□□ -1
CNOT1-222ENST00000570139 NLRP12P59046 1061 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 PPP2R5AQ15172 486 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 PPM1JQ5JR12 505 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 TDRD10Q5VZ19 366 aaKnown RBP8.81□□□□□ -1
CNOT1-222ENST00000570139 WDR75Q8IWA0 830 aaKnown RBP8.81□□□□□ -1
CNOT1-222ENST00000570139 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
CNOT1-222ENST00000570139 KLHL25Q9H0H3 589 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 BABAM1Q9NWV8 329 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 GGA1Q9UJY5 639 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 MAP3K5Q99683 1374 aa8.81□□□□□ -1
CNOT1-222ENST00000570139 WDR17Q8IZU2 1322 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 SPDYE3A6NKU9 549 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 NOP56O00567 594 aaKnown RBP8.8□□□□□ -1
CNOT1-222ENST00000570139 TSPAN6O43657 245 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 PPM1BO75688 479 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 UBOX5O94941 541 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 SDSP20132 328 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 AFF1P51825 1210 aaKnown RBP8.8□□□□□ -1
CNOT1-222ENST00000570139 PLEKHO1Q53GL0 409 aaPredicted RBP8.8□□□□□ -1
CNOT1-222ENST00000570139 POMZP3Q6PJE2 187 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 C20orf204Q6ZNR8 217 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 SLCO4C1Q6ZQN7 724 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 ADAT2Q7Z6V5 191 aaKnown RBP8.8□□□□□ -1
CNOT1-222ENST00000570139 CCDC144CPQ8IYA2 1237 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 CYB5D2Q8WUJ1 264 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 LEO1Q8WVC0 666 aaPredicted RBP8.8□□□□□ -1
CNOT1-222ENST00000570139 MBIPQ9NS73 344 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 WNK3Q9BYP7 1800 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 SOS1Q07889 1333 aaPredicted RBP8.8□□□□□ -1
CNOT1-222ENST00000570139 FANCIQ9NVI1 1328 aa8.8□□□□□ -1
CNOT1-222ENST00000570139 GNAT3A8MTJ3 354 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 PRODHO43272 600 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 EIF3JO75822 258 aaKnown RBP8.79□□□□□ -1
CNOT1-222ENST00000570139 EYA4O95677 639 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 APPP05067 770 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 POU3F2P20265 443 aaPredicted RBP8.79□□□□□ -1
CNOT1-222ENST00000570139 RRP1P56182 461 aaKnown RBP8.79□□□□□ -1
CNOT1-222ENST00000570139 GABREP78334 506 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 DHCR24Q15392 516 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 RNF219Q5W0B1 726 aaPredicted RBP8.79□□□□□ -1
CNOT1-222ENST00000570139 MSL1Q68DK7 614 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 CDC37L1Q7L3B6 337 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 BVESQ8NE79 360 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 RAPGEF4Q8WZA2 1011 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 TSR2Q969E8 191 aaKnown RBP8.79□□□□□ -1
CNOT1-222ENST00000570139 LTV1Q96GA3 475 aaPredicted RBP8.79□□□□□ -1
CNOT1-222ENST00000570139 WHRNQ9P202 907 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 APEX2Q9UBZ4 518 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 STARD13Q9Y3M8 1113 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 VIRMAQ69YN4 1812 aaKnown RBP8.79□□□□□ -1
CNOT1-222ENST00000570139 CRB1P82279 1406 aa8.79□□□□□ -1
CNOT1-222ENST00000570139 JCADQ9P266 1359 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 NRAPQ86VF7 1730 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 C9IYK1 514 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 CBFA2T2O43439 604 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 PLIN1O60240 522 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 BRINP1O60477 761 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 ZNF853P0CG23 659 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 FLT3P36888 993 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 MTHFSDQ2M296 383 aaKnown RBP8.78□□□□□ -1
CNOT1-222ENST00000570139 RAVER1Q8IY67 606 aaKnown RBP8.78□□□□□ -1
CNOT1-222ENST00000570139 RNF214Q8ND24 703 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 WDR66Q8TBY9 1149 aa8.78□□□□□ -1
CNOT1-222ENST00000570139 SIPA1L3O60292 1781 aaPredicted RBP8.77□□□□□ -1.01
CNOT1-222ENST00000570139 KDM3BQ7LBC6 1761 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 SCN11AQ9UI33 1791 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 CAND2O75155 1236 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 DNAJC8O75937 253 aaPredicted RBP8.77□□□□□ -1.01
CNOT1-222ENST00000570139 ALBP02768 609 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 ASLP04424 464 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 CAP2P40123 477 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 NEK2P51955 445 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 NEK4P51957 841 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 STRN3Q13033 797 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 ANKRD39Q53RE8 183 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 C1orf141Q5JVX7 400 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 EXOSC6Q5RKV6 272 aaKnown RBP8.77□□□□□ -1.01
CNOT1-222ENST00000570139 SMC5Q8IY18 1101 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 OSBP2Q969R2 916 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 FGD4Q96M96 766 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 ASPSCR1Q9BZE9 553 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 MKRN2Q9H000 416 aaKnown RBP8.77□□□□□ -1.01
CNOT1-222ENST00000570139 ATXN3LQ9H3M9 355 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 TRIM39Q9HCM9 518 aa8.77□□□□□ -1.01
CNOT1-222ENST00000570139 SLC5A4Q9NY91 659 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms